| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0062 |
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| Symbol | |
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| ID | 5692876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 68641 |
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| End bp | 69801 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641262638 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001527949 |
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| Protein GI | 158520079 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.629057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGA TGCAAGTGGG CTACTATCTG AAAAAACGGC AAATCCCCCC CCTGGCCCTG
ATTCCTGACC CCATTTTGGA CACCCTGGCC GGGGTCTCCA GTTTTCGGGG CCGGTTTCAG
ACCCTGACCG GGATTGAGCG GGCCCTGACC GCGTTTCGCC ACAAGGAGCC GGACCATGTG
CCGGTTTCAC CCATCTTGTG CGCCGGTGCC CGGCAGATAT CGGGCATCAC CTTTCCCGAC
TACGCGCTGG ACGGGGAAAA GGCGGCCAAA GTTTTTATGG ACGGGTACAA TTTTGTGGGC
GGCGACGCCG TTGTGCTGCT GCTGGACCTC TCCGTTGAGG CCGCCGACTT CGGCCAGGCC
ATTATCTACC CACTCAACTC CACGCCCATG CCGGACTACA AGAACCCTGT GATCACCCAC
CACGACCAGT ACCGGGCACT TAAGTCCATT CGGTTTTCCG AGGCAAAACG GATGCAGGAG
TTTGTAAAAC TCTGCCGTAT CGTGGTGGAA GAGGTGGGCC TGCGGGCCAT TGTATCCGGG
TTTGTGTTCG GCCCCTTAGG CATTCTGGCC ATGATGCGGG GCGCGGAAAA CCTGTTCAAG
GAGTGCCGCC TCTATCCAAA AGAGGTGATG GCCGCCTGCG ACACCATCAC CGAAGTGTTG
GTCGAGTTTG TGCTGGCCCA GTGTGAGGCC GGGGTGCCGG CCATTGCCAT TGACACCCTG
TTTGCCTCAA GAAGCGGCCT GCCCAAAGAC CTGTGGGAAG AGATCGAAGG CCCCTTTGCC
GGAGAGATCA GCCGGGCCAT CAAGTCCACC GGCAGGATCG TGGCCATTCA CAACTGCGGT
GACGCCCCCT ATTTTGACGC CCAGATCCGC TCCATGGACC CGGCCCTGAT CAATTTTTCC
GAGCTTCCCG ATGACTGCGC CTCCCGCAGG GAGATGAAAG AAAAGTACGG TGACCGCATC
ACCCTGATGG GCCATGTGCC CACCCCGCTG CTGGTCCACG GATCGCCCCA GGAAGTGATC
GACGAGTGCA GGCGCCACAT CGACGACCTG GCGCCTGGCG GGGGTTATAT CCTGTCACCG
GGATGCGAGT ATCCGCCCAA CATCAGCCTG GTCAATGCCT TTGCCCTGAT TCACGCGGCC
AAAACCCATG GGAGAAAATA G
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| Protein sequence | MSLMQVGYYL KKRQIPPLAL IPDPILDTLA GVSSFRGRFQ TLTGIERALT AFRHKEPDHV
PVSPILCAGA RQISGITFPD YALDGEKAAK VFMDGYNFVG GDAVVLLLDL SVEAADFGQA
IIYPLNSTPM PDYKNPVITH HDQYRALKSI RFSEAKRMQE FVKLCRIVVE EVGLRAIVSG
FVFGPLGILA MMRGAENLFK ECRLYPKEVM AACDTITEVL VEFVLAQCEA GVPAIAIDTL
FASRSGLPKD LWEEIEGPFA GEISRAIKST GRIVAIHNCG DAPYFDAQIR SMDPALINFS
ELPDDCASRR EMKEKYGDRI TLMGHVPTPL LVHGSPQEVI DECRRHIDDL APGGGYILSP
GCEYPPNISL VNAFALIHAA KTHGRK
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