Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0054 |
Symbol | |
ID | 5692868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 60975 |
End bp | 62369 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641262630 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001527941 |
Protein GI | 158520071 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.536242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACCG ATCCGAACAC ACAGACAAAA AAAAGAGCTT CCCGAAGGCG GCGCAGCCGG GCCGATAAGC CGGAGACGCC GGACACGCCG ACGCCTGCTG TCAAGGATGC CGAACCGTGG GAGAGTTCAC AGTTTGACGT GCCCCCGGAC AAAAACCGGA CCCGCTTTCA CGACATGGAC CTGCCCGATG CCCTGATGCA CGCCATCTAC GATCTGGGCT TTACCTACTG TACGCCCATT CAGGCGGAGA TCCTGCCCAG CACCCTGGCC GGAAGGGACG CCTTTGGCCG GGCACAGACC GGCACCGGCA AAACCGCGGC CTTTCTGATT TCCATTCTCA CCCACATGCA CAACAATCCT ATTACAGCCG CACGGAAACC GGGAACGCCC CGGGCCCTGG TCCTGGCGCC CACGCGGGAG CTGGTTATCC AGATCGGCGA AGAGGCCCAA CAGCTTGCCC GGCACCTTCC GGTCAACATC GTGTCGGTGT TCGGCGGCAT GGACTTCAAA CAGCAGCAGG ACCGGCTGAC CCGGGAACCG GTGGATATCA TCGTGGCCAC GCCGGGACGG CTGCTTGATT TTTCCCGGCG CCGGGCCGTG ATGCTGAAGC AGGTGGAGAT TCTGGTGATT GACGAGGCCG ACCGCATGCT GGACATGGGT TTTATTCCGG ATGTGCGCAA GATTATTTAC GCCACCCCCC AGAAGGGTAA CCGCCAGACC CTGCTGTTCA GCGCCACCCT TACCGAGGCC ATCACCCGGC TGGCCTCGGC ATGGACCCGG GACCCGGTAC AGGTGGCCAT TGAGCCGGAA CATGTGGCCG TGGATTCCGT GGACCAGGTT GTCTATATCG TCACCAGTGA CCGAAAGCTT GCCCTGCTCT ACAACATTAT CGTTCAGCAG AACCTGAGCC GTGTCCTGGT GTTCTGCAAC CGCAAGGACG CGGTCAGCCG CCTGGCCGAC AGGTTGACCA GATACGGCAT CAAGTGCGAA ATACTCACCG GCGACGTGCC CCAGCAGAAG CGGTCCCGCC GGCTTGAGGA TTTCAAGTCC GGAAAGATTC GTGTGCTGGT GGCCACCGAT GTGATGGCCC GGGGCATTCA TGTTGAAGAC ATGGACCACG TGGTCAATTT TGACCTGCCC CATGACCCGG AAGATTATGT GCACCGCATC GGCCGCACCG GCCGGGCCGG GGCCGTGGGC ACCTCCATCA GCTTTGCCGA CGAACGGGAC TCTTTTTATA TTCCCGATAT TGAAGACTTT ATGGAGCGGC CCCTTCCCTG CATTGAGCCC GACTCCACCT GGCTGGAGCT GCCGCCACCG GCGGCCCCGA AAAAAGAGCG GCCCCGAAAA ACAACGCCCC GCACCGGCCG GGTGAAGAGC ACCCCTGGAA AGTAA
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Protein sequence | MQTDPNTQTK KRASRRRRSR ADKPETPDTP TPAVKDAEPW ESSQFDVPPD KNRTRFHDMD LPDALMHAIY DLGFTYCTPI QAEILPSTLA GRDAFGRAQT GTGKTAAFLI SILTHMHNNP ITAARKPGTP RALVLAPTRE LVIQIGEEAQ QLARHLPVNI VSVFGGMDFK QQQDRLTREP VDIIVATPGR LLDFSRRRAV MLKQVEILVI DEADRMLDMG FIPDVRKIIY ATPQKGNRQT LLFSATLTEA ITRLASAWTR DPVQVAIEPE HVAVDSVDQV VYIVTSDRKL ALLYNIIVQQ NLSRVLVFCN RKDAVSRLAD RLTRYGIKCE ILTGDVPQQK RSRRLEDFKS GKIRVLVATD VMARGIHVED MDHVVNFDLP HDPEDYVHRI GRTGRAGAVG TSISFADERD SFYIPDIEDF MERPLPCIEP DSTWLELPPP AAPKKERPRK TTPRTGRVKS TPGK
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