Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0043 |
Symbol | |
ID | 5692857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 51701 |
End bp | 54091 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641262619 |
Product | LVIVD repeat-containing protein |
Protein accession | YP_001527930 |
Protein GI | 158520060 |
COG category | [S] Function unknown |
COG ID | [COG5276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000100601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC GTCTGTCCCG ATGGATGATC ACTATTTTCT GCTGCCTCTG GGCAACCGGT GTCCATGCCC TTGTGGGCGA TATTCAGCTG CTCAACCGCT GGCCCATGGC CGGCCCCAAT TCGATTGCCA TTGCCGATAT CGACGGCACC GACTATGTCT TTGTCGGGGA CGGAGAGGTG GTTTCCGTGT ATGACACCAC TCCGGCCCTG CTTTCCCGGT TTGACGTCGC CCTTTCCGGA GCGGCGGACC TGGATAAACC CGGCGAGGTG GCAGGCACCG AAGGTATTTA CGGAATTTTT TACGCGGAGA ACCACCTGTA TGTAGCCTGC GGCAACGAGG GGTTGCAAAT CTTTGACGTG ACGGACCCGC TGAATGTTGG AACACCCACG GGTGTGTATA TTCCCCGGGA AACTCTGGGC CGGGCAAAGG TTTCGGATGT GACGGTACTG GACGGATACG CCTACCTGAC CTATTTTCTG CTGACCTCCG AAGGGTACGA CAGTGGCATT CAGGTGATTG ATGTAACAAA TCCCGCGAAT CCTGTGCTGA AAGGTGAAAG CGAGCTGCCC GACACCTTTG CCGATCTGAA ACGGGCTCAA GGCCTTCATG TAACAGACAT TGACGGAACC CTTTATGCGT TTGTGGCTGA CCTTTATAAC GGTCTGGCGA TTTTTGATGT AAACGTGCCT GCCGATCCAC ACGCAGAGGC CTCTTGCTAT TTTACCTATG CCTATGACGT GACCGTTGCC GAAATTCCGG CCGACAGCGG CAATTATTAT GCGTATGTGG CCGATGATTT TGCCGGATTG CGTATCATCT CCTTTGATCC GGACGAGTTT ACCAATGAAG TGGACATCCT GTACGGTGCG GAAGGAAATG TCATTCCCAC CTGCCAGTAT GCCGGCGGCT CTTCCAAGGC CCTGTCCGTG ACGGTTGATC CGGCAAATGA GCTGGTATTT GTCGGAGACC AGTATTATGG ACTGCTGGCG ATTGATGTGT CGGACGTTGC TAAGATCAAC ACCCTTCCGG GAGATGTGGA CCTGACAGGC TATGTAACCA ACTATGCCAC GGATATGACC AGTGCCTACA GCGTGTGCGC GGAGACCGGT GGTCCCACGG TTGTTTATGT GGCAGACGCC ATCAAGGGAT TTCAGCGGGC TTCTCTGGTG GATCCCATGG ACGAAACAAC CTGGGAGATA ACAGGCGTGG AAAACACCAA TACCCCCGCA GATGCCGACG CCCTGTTTAT TGACGAGAAC ACCAATTATA TTTATGTCGT GGACGATGAT GCCACCAATG CGGGACACGA TGAGGGGCTT AGAATATTTT ATGCTATTGT TTCAGAAGAA TATTTAACCT TTTTGCTTAA AGGAAAGCTG CCCACCGATG GTGAGGCAAA GGATGTCTAT GTACACGACG GGTACGTTTA TGTGGCCGAC GGCTCCAAGG GGCTGAAGAT CATTGATCCG GGGCTGCCGG AAGATGGAGA CGACGCGGAT GAGGATGGCG ACAACCAGTT TGTGGCCCAG CCGGAACTTA CGGGAAGCTG CGTGGTGGCC GGCGGTACCG GGGATGCCAT GGATGTTGTG GTGTCCGGCA CTTTTGCCTA TGTGGCGGCC GGGGCCGGCG GGCTGAGTAT CATCAACGTG GTCAACAAAA CCGCGCCTCA AGAAAAAGGG GTACTGGGCG GCGCCCATAT TTCAGACGCC CGGGCCGTAT GGGTCAAGGA TGTGGATGGC AATGGTACCG ATGACTATGC CTATGTGGCC GACGGGGGTA ACGGTTTAAA AATAGTCGAC ATTTCCGACA AAACCAACCC CGCGCTTGTC AAAACCGTTG CGCTTGAGGG AACGGCCCAG AGCGTTTTTG AACTCAGAGG CCGGGCGTAT GTGGCGGGCG GGGATGCGGG GTTTCACGTA GTTTTTGTGT CAGATCTGGA AAACGCCCGG CTGGTCAGCG GGTATAACGC CGCCCCCTTT GAGGATGTAA AAGATGTGTT TGCCGCCATT TCCAATGAAA GCCCGGCCGT GGACCTGCTC TGGGTGGCCA CCGGAAAAAC CGGTATGGGC TTTTTTACCT ATCCGCCCGA CGTGCCCCCT CAACTGGTGG TTCATTTCGA TACCTTTGGT GACGCAAAGG CAGTCTCTGT GTTTGGTGAC TTTGCTTTCC TTGCCGACGG TGCGGGCGGG CTTCTGGCCA CAACCGTGTC CACGGCCAGC GGAGGAGCCA CAGATGAAGG GTGGGACTGG CTGGCCGGGA TCGTTCCCGT CGATATTCAT TCAACCACCT ATGGGGGATC TTCGGGATGT GCTGTGGACA CAGTGCGGCC CGCCGCCACA GGGCTGTGGC AGTCTTTAAA AAAGCTTTTT CATAAAGGGT CGGCCTTTTG A
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Protein sequence | MKQRLSRWMI TIFCCLWATG VHALVGDIQL LNRWPMAGPN SIAIADIDGT DYVFVGDGEV VSVYDTTPAL LSRFDVALSG AADLDKPGEV AGTEGIYGIF YAENHLYVAC GNEGLQIFDV TDPLNVGTPT GVYIPRETLG RAKVSDVTVL DGYAYLTYFL LTSEGYDSGI QVIDVTNPAN PVLKGESELP DTFADLKRAQ GLHVTDIDGT LYAFVADLYN GLAIFDVNVP ADPHAEASCY FTYAYDVTVA EIPADSGNYY AYVADDFAGL RIISFDPDEF TNEVDILYGA EGNVIPTCQY AGGSSKALSV TVDPANELVF VGDQYYGLLA IDVSDVAKIN TLPGDVDLTG YVTNYATDMT SAYSVCAETG GPTVVYVADA IKGFQRASLV DPMDETTWEI TGVENTNTPA DADALFIDEN TNYIYVVDDD ATNAGHDEGL RIFYAIVSEE YLTFLLKGKL PTDGEAKDVY VHDGYVYVAD GSKGLKIIDP GLPEDGDDAD EDGDNQFVAQ PELTGSCVVA GGTGDAMDVV VSGTFAYVAA GAGGLSIINV VNKTAPQEKG VLGGAHISDA RAVWVKDVDG NGTDDYAYVA DGGNGLKIVD ISDKTNPALV KTVALEGTAQ SVFELRGRAY VAGGDAGFHV VFVSDLENAR LVSGYNAAPF EDVKDVFAAI SNESPAVDLL WVATGKTGMG FFTYPPDVPP QLVVHFDTFG DAKAVSVFGD FAFLADGAGG LLATTVSTAS GGATDEGWDW LAGIVPVDIH STTYGGSSGC AVDTVRPAAT GLWQSLKKLF HKGSAF
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