Gene Dole_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0041 
Symbol 
ID5692855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp49047 
End bp50552 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content61% 
IMG OID641262617 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001527928 
Protein GI158520058 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0492791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCAC GCGGGGAAAA AGTTTTTCGG CTCGGCCAGA GACCTGCCTT TGACGACATG 
CTTATCGGCC TGAGCGCGGC GCCCAAAATT CCGGCCGGCC TGGTCCGGGA AACGCGGGAG
GTGGTGGCCC TGGCCCGAAA GTTCAACGAC GAAGTGGTCC GGCCCTATAC CGCGGAGCTG
GACCTGAAGA TGCACGCCGA CCCGAACTTT ATTCCCTACG AATTTGTCTC TAAGGCCAAT
GAATGGGGAT TTTACACGAT GTGGATTCCC CGCATCTTTG GCGGCAGGGG ATACAACATG
CCCAGCATGT CGGTCTTTGT GGAGGAGATC GGCTCGGCCT GCCTGGCCAT GGCCAACCTC
ATCGGCGTGC ACTACCTGGG GGTGGCCACG CTCTGCGCCG CCTGGAACGC GGCCATGATC
AACCGGCTCT GCCGGGACGT GGCCGCCGGT GAAAAAAACG GGGTTCCCTG CCTGATCTCC
CTGGCCATCA CCGAGCCCGG GGCGGGCACC GACGTGGAGG AGGTGGACCT GGTGGACCGG
GCCAACCTCT CCTGCCTGGC CCGGCGGGTG GAGGGCGGAT ACATGGTCAA CGGCACCAAG
ATATTTATTT CCAACGGCCA TATCTCCACC TGGCACATGC TCATCACCTA CACCGACCTG
GAAAAGCCGT CTGAAAACAC GGTGATGCTG GCCGTCAAAA CCGGAGACAA GGGGTTTTCC
TTTGGCCGCA TGGAACACAA GCTGGGGCAG AAAGGGTGCC CGGCCAGCGA ACTGGTTTTC
AAGGACTGCT TTATTCCCGA TGACCGGGTC TGCTTCGGCT GGGACCTGGC CGGCCCACGG
CCGAGGCGGG ACCGAAGGGC CGCCACCATG CAAGTCATTG ATTTCGTGGT GTCCGCCACC
CGGGCCGGTG TGGGGGCCTT TGCCACGGGT GGCGCCCGGG GGGCCTTTGA AACGGCCCTG
GCCTTTGCCG CTGAAACCGA GGTCAACGGT AGCCTGCTGA TCAACCACGA GTGGGCCCAG
TGCATGCTGG CCGAAATGTA TAAAAACGTG GTGGTGTCCC GGCTGACCTA CGTGGAGGCC
AACCACGCCA ACGGACGGTA CGGCTTTTAC CGGCTGATGC AGCAGAAAAT CATGTTTTAC
TACTTAAAAT ACGTGCCGGC CTTTATTGTC GAAAAAATCA TATCCCCGCT TCTGGAAACA
CCAGGGGCGA CCTGGCTGCT GCGAAAGGTG ATGGCCGACG GCCAGACCGA CGAGGAGCTT
GAGCGCTGCT CGGGCATGGC CTCGCTTTCC AAGTTTGCCG CCTCGGACGC AGGCATACGG
AACTGCCACC TGGCCCTGGA GATGATGGGC CAGGCCGGGC TGCGGCACGA CCGGCGGGCT
GAAAAAATCC TGCGCGACGC CAAGCTCTTG CAGATTTACG AGGGCACCAA CCAGCTCAAC
CGGCTCAACC TGTTTAAAAA CCTCATCGGC CGGGATTATC CCCAGGCAAC GGTGTTCGAC
GAGTAG
 
Protein sequence
MISRGEKVFR LGQRPAFDDM LIGLSAAPKI PAGLVRETRE VVALARKFND EVVRPYTAEL 
DLKMHADPNF IPYEFVSKAN EWGFYTMWIP RIFGGRGYNM PSMSVFVEEI GSACLAMANL
IGVHYLGVAT LCAAWNAAMI NRLCRDVAAG EKNGVPCLIS LAITEPGAGT DVEEVDLVDR
ANLSCLARRV EGGYMVNGTK IFISNGHIST WHMLITYTDL EKPSENTVML AVKTGDKGFS
FGRMEHKLGQ KGCPASELVF KDCFIPDDRV CFGWDLAGPR PRRDRRAATM QVIDFVVSAT
RAGVGAFATG GARGAFETAL AFAAETEVNG SLLINHEWAQ CMLAEMYKNV VVSRLTYVEA
NHANGRYGFY RLMQQKIMFY YLKYVPAFIV EKIISPLLET PGATWLLRKV MADGQTDEEL
ERCSGMASLS KFAASDAGIR NCHLALEMMG QAGLRHDRRA EKILRDAKLL QIYEGTNQLN
RLNLFKNLIG RDYPQATVFD E