Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0041 |
Symbol | |
ID | 5692855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 49047 |
End bp | 50552 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641262617 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001527928 |
Protein GI | 158520058 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0492791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAC GCGGGGAAAA AGTTTTTCGG CTCGGCCAGA GACCTGCCTT TGACGACATG CTTATCGGCC TGAGCGCGGC GCCCAAAATT CCGGCCGGCC TGGTCCGGGA AACGCGGGAG GTGGTGGCCC TGGCCCGAAA GTTCAACGAC GAAGTGGTCC GGCCCTATAC CGCGGAGCTG GACCTGAAGA TGCACGCCGA CCCGAACTTT ATTCCCTACG AATTTGTCTC TAAGGCCAAT GAATGGGGAT TTTACACGAT GTGGATTCCC CGCATCTTTG GCGGCAGGGG ATACAACATG CCCAGCATGT CGGTCTTTGT GGAGGAGATC GGCTCGGCCT GCCTGGCCAT GGCCAACCTC ATCGGCGTGC ACTACCTGGG GGTGGCCACG CTCTGCGCCG CCTGGAACGC GGCCATGATC AACCGGCTCT GCCGGGACGT GGCCGCCGGT GAAAAAAACG GGGTTCCCTG CCTGATCTCC CTGGCCATCA CCGAGCCCGG GGCGGGCACC GACGTGGAGG AGGTGGACCT GGTGGACCGG GCCAACCTCT CCTGCCTGGC CCGGCGGGTG GAGGGCGGAT ACATGGTCAA CGGCACCAAG ATATTTATTT CCAACGGCCA TATCTCCACC TGGCACATGC TCATCACCTA CACCGACCTG GAAAAGCCGT CTGAAAACAC GGTGATGCTG GCCGTCAAAA CCGGAGACAA GGGGTTTTCC TTTGGCCGCA TGGAACACAA GCTGGGGCAG AAAGGGTGCC CGGCCAGCGA ACTGGTTTTC AAGGACTGCT TTATTCCCGA TGACCGGGTC TGCTTCGGCT GGGACCTGGC CGGCCCACGG CCGAGGCGGG ACCGAAGGGC CGCCACCATG CAAGTCATTG ATTTCGTGGT GTCCGCCACC CGGGCCGGTG TGGGGGCCTT TGCCACGGGT GGCGCCCGGG GGGCCTTTGA AACGGCCCTG GCCTTTGCCG CTGAAACCGA GGTCAACGGT AGCCTGCTGA TCAACCACGA GTGGGCCCAG TGCATGCTGG CCGAAATGTA TAAAAACGTG GTGGTGTCCC GGCTGACCTA CGTGGAGGCC AACCACGCCA ACGGACGGTA CGGCTTTTAC CGGCTGATGC AGCAGAAAAT CATGTTTTAC TACTTAAAAT ACGTGCCGGC CTTTATTGTC GAAAAAATCA TATCCCCGCT TCTGGAAACA CCAGGGGCGA CCTGGCTGCT GCGAAAGGTG ATGGCCGACG GCCAGACCGA CGAGGAGCTT GAGCGCTGCT CGGGCATGGC CTCGCTTTCC AAGTTTGCCG CCTCGGACGC AGGCATACGG AACTGCCACC TGGCCCTGGA GATGATGGGC CAGGCCGGGC TGCGGCACGA CCGGCGGGCT GAAAAAATCC TGCGCGACGC CAAGCTCTTG CAGATTTACG AGGGCACCAA CCAGCTCAAC CGGCTCAACC TGTTTAAAAA CCTCATCGGC CGGGATTATC CCCAGGCAAC GGTGTTCGAC GAGTAG
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Protein sequence | MISRGEKVFR LGQRPAFDDM LIGLSAAPKI PAGLVRETRE VVALARKFND EVVRPYTAEL DLKMHADPNF IPYEFVSKAN EWGFYTMWIP RIFGGRGYNM PSMSVFVEEI GSACLAMANL IGVHYLGVAT LCAAWNAAMI NRLCRDVAAG EKNGVPCLIS LAITEPGAGT DVEEVDLVDR ANLSCLARRV EGGYMVNGTK IFISNGHIST WHMLITYTDL EKPSENTVML AVKTGDKGFS FGRMEHKLGQ KGCPASELVF KDCFIPDDRV CFGWDLAGPR PRRDRRAATM QVIDFVVSAT RAGVGAFATG GARGAFETAL AFAAETEVNG SLLINHEWAQ CMLAEMYKNV VVSRLTYVEA NHANGRYGFY RLMQQKIMFY YLKYVPAFIV EKIISPLLET PGATWLLRKV MADGQTDEEL ERCSGMASLS KFAASDAGIR NCHLALEMMG QAGLRHDRRA EKILRDAKLL QIYEGTNQLN RLNLFKNLIG RDYPQATVFD E
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