| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0025 |
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| Symbol | |
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| ID | 5692839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 25106 |
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| End bp | 27145 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641262601 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001527912 |
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| Protein GI | 158520042 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA GTCGATACAT AGAGGTGGCA ATCCACCTGC CGGTTTTTCA GACCTACACC
TACAGCGTTC CCGAACCGCT TCTTCTGCAG GCGGTTTGCG GCCGGCGGGT GCAAGTGCCC
TTTGGCCGGC AGATGGTTGC CGGCACGGTG CTTGGCGAGG CGACCGCCTG TGACAATGCT
GAAATAAAAC CCGTGGCGGC CGTGCTGGAC GACGGGCCCC TGTTTCCCGC CACCATGATT
CCCTTTTTCC GGTGGGTCGC CGACTACTAC CTGTATCCCC TGGGTGAAAC CATTGCCAAC
GCCCTGCCGG CAGGAGACCT GCCGAAAAAA AGCGCGCCGC CGGTCGGAAA AATTCCGAAA
GACGCCGTGG GAGACCCCAT TCTGCCGGAC ACGCCGCCGG ACCTGACCAC CGATCAGGAG
GCCGTGGTGG CGGACCTGGT TTCCCGTCTG GATGCGGGGT TCTGCTCCTG CCTGCTGGCC
GGCATCACCG GCAGCGGCAA AACCGAAGTA TACATGCGGG TGGTGGCCGC AGCCCTGGCC
ATGGGCAAAA CCGCCCTGGT GCTGGTGCCG GAGATCGCCC TGATCGCCCA GGCCGAGCAC
CGGTTCTGCG CCCGGTTCGG CCATACCGTG GCCGTGCTGC ACAGCGGCCT CTCCCGGACC
GAGCGCTGGC ACCAGTGGTC AAAGATTGCC CGGGGTGAAG CGGCCATTGC CATCGGCACC
CGGTCGGCGG TGTTTGCGCC CCTGGACCGG CCGGGGATCA TCATCGTGGA TGAGGAGCAC
GACACCTCCT ACAAGCAGGA GAGCGGCCTG CGCTACAATG CCTGCGACCT GGCCGTGGTC
CGGGCCAAGC TTTCGGACGC CGTGGTGGTG CTGGGGTCGG CCACACCCTC GGTCCAGTCG
CTTCACAACG CGACAACCGG CAAGTTTTCC AAAACCTACC GGATGGATCG GCGCATCAAC
CGCCAGCCCC TGCCGGCCAT CACCGTGGTG GACCTTCGGG AACAGCAGGC CCGCCGGGGC
CCCCGGGCCT ATATCAGCGA CGAGCTGCAC CGTGCCATGG CGGAAACCCT GGCGCAGGGC
AACCAGGTGC TGCTGTTTTT AAACCGCCGG GGGTTTGCCA GCCTGCCGGT GTGCGCGGCC
TGCGGCAACA CCATTAAATG CAAACACTGT GACATCTCCC TCACCCTGCA CAAGGGGGCC
AATGCCTTCC GGTGCCATTT CTGCGGCTAT TCCCGGGCCG CGGCCAGGGG CTGCGACATC
TGCGGATCTT CCTCCATCAA GCTGCTGGGC TTGGGCACGG AAAAGGTGGA AGAAGCGGTA
AAACAGCTTT TTCCCGAGGC ATCGGTGGCC CGGCTGGACC GGGACACCAC CACCCGGAAA
GGGGCCATGC TCCGTATTCT CAAAGACCTG AAAAATCGGA AGATCGACAT TCTGGTGGGC
ACCCAGATGA TCGCCAAGGG CCACGACTTT CCCGGCATCA CCCTGATCGG GGTCATCTGT
GCCGACCTCT CCCTGAATTT TCCCGATTTC CGGGCCGGCG AGCGGACCTT TCAGCTTCTG
GCCCAGGTTG CGGGCCGGGC CGGCCGGGGC GTGGATCCCG GCCGGGTGAT TCTGCAGACC
TACAACCCGG ATCACTTGTG TATCGCCGCC GCCACGCGCC AGGACGGGTC GGCCTTTTAC
GACCAGGAGA TCGCCTTTCG CCGGCAGCTG GGCTACCCGC CCTTTTCCCG GATGGTTCAC
CTTCACATCT CAGCCACGGA CCCGGCAAAG GCAAAGGCAC GGGCACGGGA GGCCGGGGAT
TGCTGCACGG CCCTGAAAAA CAGCGCCCCC GCGGTCTTTG GCGCTGTGGA GGTGCTGGGC
CCGGTGGAGG CCCCCATTCA CAAGCTGGCC AGCCGCTACC GGTGGCAGAT CCTTTTAAAA
AGCCGGTCCG CGGCAGCGGT CAAGTCCTTT GCCGCCCGGC TTCTGGCCCA AGACGGCCAA
CGGCTCAGAA AGGGAGGCGT CCGGCTGGTG GTGGATGTGG ATCCCTTTTT CATGATGTAA
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| Protein sequence | MSDSRYIEVA IHLPVFQTYT YSVPEPLLLQ AVCGRRVQVP FGRQMVAGTV LGEATACDNA
EIKPVAAVLD DGPLFPATMI PFFRWVADYY LYPLGETIAN ALPAGDLPKK SAPPVGKIPK
DAVGDPILPD TPPDLTTDQE AVVADLVSRL DAGFCSCLLA GITGSGKTEV YMRVVAAALA
MGKTALVLVP EIALIAQAEH RFCARFGHTV AVLHSGLSRT ERWHQWSKIA RGEAAIAIGT
RSAVFAPLDR PGIIIVDEEH DTSYKQESGL RYNACDLAVV RAKLSDAVVV LGSATPSVQS
LHNATTGKFS KTYRMDRRIN RQPLPAITVV DLREQQARRG PRAYISDELH RAMAETLAQG
NQVLLFLNRR GFASLPVCAA CGNTIKCKHC DISLTLHKGA NAFRCHFCGY SRAAARGCDI
CGSSSIKLLG LGTEKVEEAV KQLFPEASVA RLDRDTTTRK GAMLRILKDL KNRKIDILVG
TQMIAKGHDF PGITLIGVIC ADLSLNFPDF RAGERTFQLL AQVAGRAGRG VDPGRVILQT
YNPDHLCIAA ATRQDGSAFY DQEIAFRRQL GYPPFSRMVH LHISATDPAK AKARAREAGD
CCTALKNSAP AVFGAVEVLG PVEAPIHKLA SRYRWQILLK SRSAAAVKSF AARLLAQDGQ
RLRKGGVRLV VDVDPFFMM
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