Gene Dole_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0024 
Symbol 
ID5692838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp23770 
End bp24261 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID641262600 
Productphosphodiesterase 
Protein accessionYP_001527911 
Protein GI158520041 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATGG CCGTGATGAG CGATTCCCAC GACAACATCG CCAACATGCG AAAGGCCGTG 
GCAAAGGTCC GGGAAGCCGG ATGTGAAATG ATTCTTCACT GCGGCGATTT TGTGGCCCCC 
TTTATGCTGG CGGAACTGGA TATGGCCGGC ATTCCGGTTC ACGGCGTGTT CGGCAACAAC 
GACGGGGACC GGTACCTGTT GACGAAAAAC GCGTTGACCG TTCATAAAAA CATTACGCTT 
CACGGCGATT TTGGCCGCCT GGCGGCTGAC GGTCGACAGG TGGCCTTTAT TCATGACGGC 
ACCATTGCCG ACGACCTGGC CGGCGGGGGC CGGTACGACA TTGTCTGTTT CGGCCATTTT 
CATGTCTGGA TGCAGAAAAA AGTCAACCAC ACCCTGGTGG TCAACCCTGG CGAACTGCTG 
GGAAAAGACG ATACCCCGGG GTTTTGCGTG GTGGACACGG CCGCGCTTTT GGCGGAAAGA 
GTACTCATAT AA
 
Protein sequence
MLMAVMSDSH DNIANMRKAV AKVREAGCEM ILHCGDFVAP FMLAELDMAG IPVHGVFGNN 
DGDRYLLTKN ALTVHKNITL HGDFGRLAAD GRQVAFIHDG TIADDLAGGG RYDIVCFGHF 
HVWMQKKVNH TLVVNPGELL GKDDTPGFCV VDTAALLAER VLI