Gene Dole_0010 details

Gene Information

• Locus tag: Dole_0010
• Symbol: rpsF
• ID: 5692824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 9267
• End bp: 9773
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641262586
• Product: 30S ribosomal protein S6
• Protein accession: YP_001527897
• Protein GI: 158520027
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.490507
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACGGT ACGAGACCAT TTTTATCGCA GATCCCGATC TGTCCCCCGA AAACCAGGCC 
CAGCTTTTTG AAAAAGCCAC CACCCTGATC GACGCCAACA GCGGCGTGCT GGTGGAATTT 
GACGAGTGGG GTACCCGCCG GCTGGCCTAC GAGATTCGCA AGAAACCCCG GGGCCACTAT 
GTGCGGTTGG ACTTCTGCGG CGACGGCGCA ACGGTCCAGG GGCTTGAAAA CGCGTTCCGC 
ATCGACGAGC GGGTCCTCAA GTTCATGACG GTTTTTCTTT CCGAAAACGC CGACCCCGAG 
GCCCTTCGCC AGGCCATTGC CGAGGAAAAG GAAAAGAAGG CCGAAGGCCA GGCCGCCGCG 
GACGCGGCCC CGGCCGATGG TGACGACGAG GCCCCGAAGC AGCCGGCCCC GGCCAGTGAC 
GACGACGCCC CGAAGCAGCC GGAGACGGAA GCCGGTTCTG ATGAAACCGA AGCCGCGGCG 
GCTGACAAGA GCGACGACAA CGCATAA 

 

Protein sequence

MRRYETIFIA DPDLSPENQA QLFEKATTLI DANSGVLVEF DEWGTRRLAY EIRKKPRGHY 
VRLDFCGDGA TVQGLENAFR IDERVLKFMT VFLSENADPE ALRQAIAEEK EKKAEGQAAA 
DAAPADGDDE APKQPAPASD DDAPKQPETE AGSDETEAAA ADKSDDNA