Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0005 |
Symbol | |
ID | 5692819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 4067 |
End bp | 5764 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641262581 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_001527892 |
Protein GI | 158520022 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GACCCCACGG CAACACCGGC GGCCTCAAGG CCGACCACCT GCGGCGACTG GACAACCTGT ACCGGCGCCG GGTTCCCTCC TCGTTTCTCG TGACACCGGA GCTGGCCCGT GAGCTGTGCC TGCTCTCCCG GGAGATTCGC CGGCAGATCG GCCTGCTGAT CGACCGCCAG GGAGTGGTGG CCCACGTGAT CGTTGGCACG GACAGCGCCA TCGTGATTCC CGACATCAGC GAATACCGCA CCGCCGCCGG CCGGCTGAGG GGGCTCAAGT GCGTTCACAC CCACCTGGGC CCTGACCCCC TGACCGCTGA CGACATCACC GACCTCTCCC TGCTGCGGCT GGACATCATG GCCGCCGTGG CCGATACCGG CGGGCCGGAA GAAAACCCCC GGTACCGCGT GTACGGTGCC CACCTGCTGC CCGGCAACGG CGAAGGCGGT CCGTCCGGGC CGTCGTGCAA GGTGCTCGAC CCCCTGGGTC ACGCGGACCT GGACATCGGC TGTGACGGCC TGATCGCCTC CCTGGAGGAT GAACTGGCCC AGGCCGGTGC CCTGCGGGAG GCCGGGCAAA AGAGCGACCG GGCCATTCTG GTTTCCGTGA CCGGCGCCCC CCGGGCCGCG GCCGGGGCCT CCCTTACCGA GCTTTCCGCC CTGGCGGCTT CGGCCGATAT CGCGGTAGTA GACACGGTTC TCCAGTTTCG AAAAAAGACC GACGCCCGGT TTCTCCTGGG CCGTGGCAAG CTGGGGGAGC TGGCCGTGCT GGCCCTGCAG ACCGGGGCCA ACCTGCTGGT GTTCGACCAG GAGCTCAACC CCTCCCAGAT CCGGTCCATC ACCGACCAGG TGGACATCAA GGTGATCGAC CGCACCCAGC TGATCTTAGA CATTTTTGCC CAGCGGGCCC AGTCCATGGA GGGTAAGCTC CAGGTGGCCC ATGCTCAGCT CAAGTACCTT CTGCCCCGGC TGGTGACCAA GAACACGGCC ATGTCCCGGC TCACCGGCGG CATCGGGGGC CGGGGACCCG GCGAAACCAA GCTGGAGATC AACCGGCGAC GGGTGAGGGA CCAGCTGGCC CGGCTGGAAA AGCAGCTGGA GTCGATCAAA AAGCAGCGGC GCCAGCAGAA GGCCCGTCGG GACAAGCGAG CCCTGCCGGT GATCTCCATT CTCGGCTATA CCAATGCCGG CAAGTCCACC CTGCTCAACA CCCTGTCAAA AAGTGGCGTG GCCACTGCGG ACCGGCTGTT CATGACCCTG GATCCGGCCA GCCGGCGCAT TCGGTTTCCC CGGGAGATGG ACGTGATTCT CACCGATACC GTGGGATTTA TTCAGAACCT GCCCAAAGAG CTGATGGTGG CCTTTCGCGC CACCTTAGAA GAGCTGGAGC GGGCCGACCT GTTCATCCAC GTGGTGGATG CCGCCAACCC GGCGGCCGAA GCCCAGATCC GGTCCGTGGA GCGGATCGTG ACGGAACTGG GTCTCTCGCT TACGCCTATG GTTTATGCCG TCAACAAGGC GGACCGGGCC ACGCCTGAGC AGGTCGAGGC CCTGGTCAGG GCCACCGGCG GCGTGCCGGT GTCAGCCAAC AATGCCGCCA CCCTGGGGCC CCTGATCGAC CGGCTGGCCG ACCGGGTGGG GCAAATTGTC AAGCATAACC GGCGGTTATC GGAAAATCCA GTAATTTCAG ATTATTGA
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Protein sequence | MKKRPHGNTG GLKADHLRRL DNLYRRRVPS SFLVTPELAR ELCLLSREIR RQIGLLIDRQ GVVAHVIVGT DSAIVIPDIS EYRTAAGRLR GLKCVHTHLG PDPLTADDIT DLSLLRLDIM AAVADTGGPE ENPRYRVYGA HLLPGNGEGG PSGPSCKVLD PLGHADLDIG CDGLIASLED ELAQAGALRE AGQKSDRAIL VSVTGAPRAA AGASLTELSA LAASADIAVV DTVLQFRKKT DARFLLGRGK LGELAVLALQ TGANLLVFDQ ELNPSQIRSI TDQVDIKVID RTQLILDIFA QRAQSMEGKL QVAHAQLKYL LPRLVTKNTA MSRLTGGIGG RGPGETKLEI NRRRVRDQLA RLEKQLESIK KQRRQQKARR DKRALPVISI LGYTNAGKST LLNTLSKSGV ATADRLFMTL DPASRRIRFP REMDVILTDT VGFIQNLPKE LMVAFRATLE ELERADLFIH VVDAANPAAE AQIRSVERIV TELGLSLTPM VYAVNKADRA TPEQVEALVR ATGGVPVSAN NAATLGPLID RLADRVGQIV KHNRRLSENP VISDY
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