| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0001 |
|---|
| Symbol | |
|---|
| ID | 5696138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 50 |
|---|
| End bp | 1432 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641262577 |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_001527888 |
|---|
| Protein GI | 158520018 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCTG TCTGGAAAAA AGTAAAAGCT GACTTAAAAA CGCATGTGCC GTTAAACAAC
TACATGATGT GGATTGAGCC CCTGGAGTTC GAATCCGCAC AGCCCGACAC CCTTGTGCTG
AACTGCCCCA ACTCCTTTTC CAAAAAATGG GTGGCCGGCA ACTACGAAAA ACTGATTGCC
GAGAAGGTTT GCGGGCTCTG CGGAAAACAG GTCCACCTTC GCCTGGAGGT GGCCCCCCCG
GGTACCGGCG CAAAAAAGCA GTCGCCGGCA CCGGATTCAA CCGCCATTCC CTCCGGGACA
CACACCCGGT CCGACGCCCA GCTGACGCTG CCCTCTGTCC AGGTTAAACC CGCCACGGGC
CGGGTACTCA AAGCCGATTA CACTTTTGAC AACTTCGTGG TGGGCAACCA TAACGATTTT
GCCTATACCG CGGTCCTCTC CCTGGGAGCC CGGCAACAGT CCGGGGGCCG GTCCCTGTTT
CTCTCCTCCC GGCCGGGCAT GGGCAAAAGC CATCTGGCCC AGGCACTGGG CCACCAGACC
ATAAAAGCCC AGCCCGGATG CCGGGTCTAT TACACCACGG TGGAGGATTT TTCCAACGAG
ATGGTGTACG CCTACACCAC CAAGTCCAGC GGCGCCTTTA AAAAGAAGTA CCGCACCGGG
TTTGACATGC TGCTGATCGA TGACATTCAT GCCCTGGCCG GAAAAGACCG CACCCAGGAG
GAGCTGGCCA TGGTGGTGGA CTACATGCTG GAGGCCGACC GAAAGGTGCT GTTTGCCGGA
TGCTGCCTGC CCGGTGAAAT TCCCAAAATG AACGACCAGC TCAAGAGCCG CCTCTCCTGC
GGCCTGATCA CCACCATGGA AACCCCGGAC TTTACCACCC GGGTCCGCAT TCTGGAGAAA
AAGGCAAGAT TTTACGGGTA TGCCGTGCCC CGGGACATTC TCGAATACCT GGCCGATGTG
CTGACCGAAG ATGTGCGCCA GCTGGAAAGC GGGCTGGCCA ACCTGGCAAC CAAGTCCTGC
CTGCTGGGCG TGCCCATGGA CAGGGAGCTG GCCGAAAGCA TCATCAAAAA CATGGCGGTG
CGAAACGGCG CGATCACCCT GGATGCCATC AAAAAGGTGG TGTGCAAGGC CTACGGACTT
GCCGCCAAAG AGATCGACTC CCGGTCCCGC AAGCACCGGG TCGCCTGGCC CCGGCAGGTG
GCCATCTACC TCTCCCGGCG CTATACCGAC CACTCCCTCA AAGCCATCGG CCGCAGCTAC
AACCGGTACC ACGCCACAGT GCTGCACTCC ATCAACACCG TTGAGCAGGC AATGAAGGCA
AACCGCTCGG TTTTTCAGGA AGTGGACTAT ATTATTCAGA AAATAGAATC CGGCAAGATT
TAA
|
|---|
| Protein sequence | MDSVWKKVKA DLKTHVPLNN YMMWIEPLEF ESAQPDTLVL NCPNSFSKKW VAGNYEKLIA
EKVCGLCGKQ VHLRLEVAPP GTGAKKQSPA PDSTAIPSGT HTRSDAQLTL PSVQVKPATG
RVLKADYTFD NFVVGNHNDF AYTAVLSLGA RQQSGGRSLF LSSRPGMGKS HLAQALGHQT
IKAQPGCRVY YTTVEDFSNE MVYAYTTKSS GAFKKKYRTG FDMLLIDDIH ALAGKDRTQE
ELAMVVDYML EADRKVLFAG CCLPGEIPKM NDQLKSRLSC GLITTMETPD FTTRVRILEK
KARFYGYAVP RDILEYLADV LTEDVRQLES GLANLATKSC LLGVPMDREL AESIIKNMAV
RNGAITLDAI KKVVCKAYGL AAKEIDSRSR KHRVAWPRQV AIYLSRRYTD HSLKAIGRSY
NRYHATVLHS INTVEQAMKA NRSVFQEVDY IIQKIESGKI
|
|---|
| |