| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_3110 |
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| Symbol | |
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| ID | 5687573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009939 |
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| Strand | + |
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| Start bp | 200767 |
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| End bp | 203709 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641262573 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001527847 |
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| Protein GI | 158421620 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC TCAAGATCAG CGAAGCCGGC ACCGTGCAAT TCCCGATGGT GGAACACGCG
GTGGAGATCG GCTGGACTTC AATCACGCCG GAGGACGCAC GCACCAAGCG CGGCGGCGAG
GCGGGCACCT TCTTCCGCGA CGTGCTGGAA GCCAAGCTCG CCGCGTTCAA CCCTTGGATG
TCCGCCAACG CGGTGCGCTC CGTGGTGGAA ACCCTGGACG CGCTGCCGGC CAGCATCGAG
GGCAATCGCG AGCGCCTGGC CTGGCTGCGA GGGGAACGCT CCTGGTTCGA CGAACAGGAA
AAGCGCCATC GACGCGTCCA CCTCATCGAC TTCGAGCACG TGACGGACAA CGCCTTTCAC
GTCACCTGGG AATGGAAGAT CAAGCCGCCC GCGCGCAAGG GCAACCGGGC CGACGTGATG
TTCCTGGTCA ACGGCGTGCC GGTGTGCATC GTCGAGCACA AGAACCCGAA AGACGGCGAC
GCTATCGAGC GCGCCGTCAA GCAACTGCGC CGCTACGAGC TGGAAACGCC GGAGCTCTTG
GCATGCCCGC AACTCTTCAA CGTCACCCAC CTGCTCGACT ATTGGTATGG CGTGACCTGG
AACGCCAACC GGCGCGACAT GGCGCGCTGG AAGCAGGCAC CGGAGGAAAC CTACCGCTTT
GCGGTGCAAT CCTTTTTCGA GCCGACCGAC TTCCTGCGCA CGCTGCGGCA CTGGATCTTG
TTCTACGTGC AGGACGGCGA GACCCGCAAG TCGGTGCTGC GCCAGCACCA GCGGCGCGCC
ATCGACGCCA TCCTGAACCG CTGTGCCGAC CCAACCAAGA CAAGGGGCCT CATCTGGCAC
ACCCAGGGCT CGGGTAAGAC CTTTACGCTG CTGACCGCCG CTCGCCTGAT CCTGGAGGAC
AAGGCGCGCT TCGCCAACGC GACGGTGATT CTGGTGGTGG ACCGCACCGA GCTGGAAGGC
CAGTTGAAGG GCTGGGTGGA GCGCCTGCTG GGCGAGATGC AGAGCCAGGA CATCGCGGTC
AGGCGCGCCA ACAACAAGGC CGAACTTCAG TCCCTGCTGG ATGCCGACTT CCGCGGCCTG
ATCCTCTCGA TGATCCATAA GTTCGAGGCC ATCCGCAAAG ACAGCGTTCT GCGCGACAAC
GTCTACGTAT TCATCGACGA AGCGCACCGA TCGGTCGCCA AGGACCTCGG CACCTACCTG
ATGGCGGCCG TACCCAAGGC CACAATCATC GGCTTCACCG GCACACCCAT CGCGCGTACG
GCGCAAGGCG AAGGTACGTT CAAGATCTTC GGCACGCAGG ACGAGCTTGG GTATCTCGAC
AAGTACTCCA TCGCCGAGAG CATCGCCGAC GAGACGACCC TGCCGATCAA ACACGTGATG
GCGCCCAGCG AGATGACGGT GCCTGCCGAA CGGCTGGACA AGGAGTTCTT CGCGCTGGCC
GAGAGCGAAG GCATGACCGA TGTCGAGGAA CTGAACAAGG TGCTCGACCG CGCGGTGGGC
TTGCGCACCT TCTTGACGGC GGACGACCGC ATCGAGAAGG TGTCGGCCTT CATCGCCGAG
CACTTCAAGG AGAACGTGCT GCCTCTAGGC TACAAGGCCT TCGTGGTGGC AGTGAACCGC
GAGGCCTGCG CTAAGTATAA GAAGGCGCTG GACAAGCTGC TGCCTCCTGA GTGGACCGCG
CCGGTCTACA CAGAGAACTC CGCCGATGTG GTGGACCGAC CGCTGGTGGC CGAGTTGCAG
CTGTCGGACG AACAGGAAGA ACAAGTCCGC CTGCTGTTCA AGAAGCCTGC CGAGAACCCG
AAGATCCTGA TTGTCACCGA CAAGCTGCTC ACCGGCTACG ACGCGCCGCC GCTTTACTGC
CTGTACCTCG ACAAGCCGAT GCGCGACCAC GTGCTGCTGC AGTCGATTGC GCGTGTGAAC
CGCCCTTATG TAGATGCCAA CGGCGTGCAG AAGCGGGTGG GCCTCGTGGT GGACTTCGTC
GGCGTGCTGC GCGAGCTGAA GAAGGCGCTG CAATTCGATT CCAGCGACGT CAGCGGTGTG
ATCGAGGATT TGGATGTGCT GCTGCAGGAC TGCTTGCAAC GCATCGAGCA GGCCAAAAAG
GACTACCTCG AGACGGACGC CAGCGGTACG CCCGACGAGC GGCTGGAGCG TCTGGTGTTC
GGCCGCTTCC TGACGCCTGA GGCGCGCAAG ACCTTCTTCG AGCACTACAA GGAGATCGAG
GCGCTGTGGG AAATCCTCTC GCCCGACCCT CAGCTCCGTG ACCACATTGC GACCTACAAG
CAGCTTAGTC AGCTCTATGC GGCCGTGCGC AATGCCTACG CCGAAAAAGT TGGGTTTGTG
GCTGACCTAG CCTACAAGAC GCGGCGACTG ATCGAGGAAA GCGCGGAGCA ACATGGTCTT
GGGCGATTGA CTAAGACTGT GACCTTTGAT GTGGCAACCT TGAAGTCGCT GCGCGGTGAG
AAAGGTTCCG ACGAGGGCAA GGTGTTCAAC CTGGTGCGCG GGCTGCAGCA CGAGATCGAC
GAGGACCCTG TGGCAGCGCC GGTGCTGCAA CCGCTGAAAG ATCGTGCCGA GCGCATCCTG
AAGGATCTGG AAGAGCGCAA GACGACCGGT CTGGCGGCGA TGGACCAACT GGCGGCGTTG
GCGGCGGAGA AGGAAGCGGC CATGAAGGCG GCGCGCGACA GCGGCCTTTC GCCCCGCGCC
TTTGCCGTCG CCTGGGCGCT GCGTGAGGAC GCGGCCATCA AGGCCGCGGG CATCGACCTC
ATGACGTTGG CCAAGGACGC CGAAGACTTG CTCGGGCGTT TCCCGAATGC CTCGGTCAAC
ACCGATGAAC AGCGACGGCT GCGGGCCTCG CTCTACAAGC CCTTGCTGGC CCTGGCCCCG
GACGAGCGGG CACGGATCGT CGATCTGGTG GTGCGGCAGC TGCTCACGGA GGGCAGCGAA
TGA
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| Protein sequence | MSTLKISEAG TVQFPMVEHA VEIGWTSITP EDARTKRGGE AGTFFRDVLE AKLAAFNPWM
SANAVRSVVE TLDALPASIE GNRERLAWLR GERSWFDEQE KRHRRVHLID FEHVTDNAFH
VTWEWKIKPP ARKGNRADVM FLVNGVPVCI VEHKNPKDGD AIERAVKQLR RYELETPELL
ACPQLFNVTH LLDYWYGVTW NANRRDMARW KQAPEETYRF AVQSFFEPTD FLRTLRHWIL
FYVQDGETRK SVLRQHQRRA IDAILNRCAD PTKTRGLIWH TQGSGKTFTL LTAARLILED
KARFANATVI LVVDRTELEG QLKGWVERLL GEMQSQDIAV RRANNKAELQ SLLDADFRGL
ILSMIHKFEA IRKDSVLRDN VYVFIDEAHR SVAKDLGTYL MAAVPKATII GFTGTPIART
AQGEGTFKIF GTQDELGYLD KYSIAESIAD ETTLPIKHVM APSEMTVPAE RLDKEFFALA
ESEGMTDVEE LNKVLDRAVG LRTFLTADDR IEKVSAFIAE HFKENVLPLG YKAFVVAVNR
EACAKYKKAL DKLLPPEWTA PVYTENSADV VDRPLVAELQ LSDEQEEQVR LLFKKPAENP
KILIVTDKLL TGYDAPPLYC LYLDKPMRDH VLLQSIARVN RPYVDANGVQ KRVGLVVDFV
GVLRELKKAL QFDSSDVSGV IEDLDVLLQD CLQRIEQAKK DYLETDASGT PDERLERLVF
GRFLTPEARK TFFEHYKEIE ALWEILSPDP QLRDHIATYK QLSQLYAAVR NAYAEKVGFV
ADLAYKTRRL IEESAEQHGL GRLTKTVTFD VATLKSLRGE KGSDEGKVFN LVRGLQHEID
EDPVAAPVLQ PLKDRAERIL KDLEERKTTG LAAMDQLAAL AAEKEAAMKA ARDSGLSPRA
FAVAWALRED AAIKAAGIDL MTLAKDAEDL LGRFPNASVN TDEQRRLRAS LYKPLLALAP
DERARIVDLV VRQLLTEGSE
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