Gene Franean1_R0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_R0028 
Symbol 
ID5675721 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4613567 
End bp4615067 
Gene Length1501 bp 
Protein Length 
Translation table 
GC content60% 
IMG OID641242760 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00232778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
AGAGTTTGAT CCTGGCTCAG GACGAACGCT GGCGGCGTGC TTAACACATG CAAGTCGAGC 
GAGGAGCTTG CTCCTAGCGG CGAACGGGTG AGTAACACGT GGGCAACCTG CCCCAAGCTC
TGGAATAACT CCGGGAAACC GGGGCTAATG CCGGATATGA CATCATCGGG CATCTGGTGA
TGTGGAAAGA TTTATCGGCT TGGGATGGGC CCGCGGCCTA TCAGCTTGTT GGTGGGGTGA
TGGCCTACCA AGGCGACGAC GGGTAGCCGG CCTGAGAGGG CGATCGGCCA CACTGGGACT
GAGACACGGC CCAGACTCCT ACGGGAGGCA GCAGTGGGGA ATATTGCGCA ATGGGCGAAA
GCCTGACGCA GCGACGCCGC GTGAGGGATG ACGGCCTTCG GGTTGTAAAC CTCTTTCAGC
AGGGACGAAG CGAGAGTGAC GGTACCTGCA GAAGAAGCAC CGGCCAACTA CGTGCCAGCA
GCCGCGGTAA TACGTAGGGT GCAAGCGTTG TCCGGAATTA TTGGGCGTAA AGAGCTCGTA
GGCGGCCTGT CGCGTCGGCT GTGAAAACCC GGGGCTCAAC CCCGGGCCTG CAGTCGATAC
GGGCAGGCTA GAGTCCGGTA GGGGAGACTG GAATTCCTGG TGTAGCGGTG AAATGCGCAG
ATATCAGGAG GAACACCGGT GGCGAAGGCG GGTCTCTGGG CCGGAACTGA CGCTAAGGAG
CGAAAGCGTG GGGAGCGAAC AGGATTAGAT ACCCTGGTAG TCCACGCCGT AAACGTTGGG
CGCTAGGTGT GGGGGACCTT CCACGGCCTC CGTGCCGCAG CTAACGCATT AAGCGCCCCG
CCTGGGGAGT ACGGCCGCAA GGCTAAAACT CAAAGGAATT GACGGGGGCC CGCACAAGCG
GCGGAGCATG TGGCTTAATT CGATGCAACG CGAAGAACCT TACCAGGGCT TGACATGCAG
AGAAATCCTG TAGAGATATG GGGTCCTTAG GGGCTCTGCA CAGGTGGTGC ATGGCTGTCG
TCAGCTCGTG TCGTGAGATG TTGGGTTAAG TCCCGCAACG AGCGCAACCC TTGTCCTATG
TTGCCAGCGA GTCATGTCGG GGACTCATAG GAGACTGCCG GGGTCAACTC GGAGGAAGGT
GGGGATGACG TCAAGTCATC ATGCCCCTTA CGTCCTGGGC TGCACACATG CTACAATGGC
CGGTACAATG GGCTGCGATA CCGCGAGGTG GAGCGAATCC CAAAAAGCCG GTCTCAGTTC
GGATCGGGGT CTGCAACTCG ACCCCGTGAA GTCGGAGTCG CTAGTAATCG CAGATCAGCA
ATGCTGCGGT GAATACGTTC CCGGGCCTTG TACACACCGC CCGTCACGTC ACGAAAGTCG
GTAACACCCG AAGCCGGTGG CCCAACCCTT GTGGGGGGAG CCGTCGAAGG TGGGACCGGC
GATTGGGACG AAGTCGTAAC AAGGTAGCCG TACCGGAAGG TGCGGCTGGA TCACCTCCTT
T
 
Protein sequence