Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7330 |
Symbol | |
ID | 5675631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8966095 |
End bp | 8967324 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641246167 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001511555 |
Protein GI | 158319047 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.680147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.468389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTGC TGCGTCTTGG TGACCGTGAC CCCTCTGTGG CGGAGGCCCG GGCAGCTTTC ATCCACCTGG GTTTTCTTCC CGTCGCACCC CGCCAGACCG ATGCGGCCGA CGGCCCCGGT CCGGGTGCCC TCGAGACCTC CACCGCGACG GGAACGGGTC CGTCGCCGGC CGGCGACGCC GGGAACGGCG GCCCGGTCGA CGCCACCGAC CAGTTCGACA ACGAGCTGGA CAACGCCGTC CGGGCGTTCC AGCAGAGCCG CGGGCTGTCG GTCGACGGCA TCATCGGACC CGACACCTTC CGGGCCATCG AGGAGGCTCG CCGCCGCCTC GGCGACCGGC TCCTCCACTA CAGCGTCACT CACCCGTTCG TCGGCGACGA CGTCGCCGCC CTGCAGGAGC GGCTGTCGAA CATGGGCTTC GACGTCGGCC GCGCGGACGG CATCTTCGGA GCACGGACGG ACTCGGCCGT GCGGGACTTC CAGCGCAACC GGGGCCTCGA CCCTGACGGC CTCTGCGGGC CGCGGACCCT GCGCGAGCTC AAGCGCCTCG AGCGCACGGT CACCGGCGGC CGCCCGGACG TCCTGCGCGA GTCCATGCGC CTGCTGGCCC GGGGGCCGTC GCTGCTCGGC ATGGTCGTCG CCATCGACCC CGGGCACGGC GGCGACGACC TTGGCGTGTC CAGTGGTGGG CTGTGCGAGC GTGACCTGAT GGCCGACCTG GCCTCGCGGC TGGAGGCCCG GCTGCTCGCG TCCGGCCTGG AGGCCTACCC GGTGCACGGG CCACACGAGT CGCCGCCCGA GGCGGAACGC GCGGCGCGGG CGAACGAGAT CGGCGCCGAC CTGCTGGTCT CGCTGCACGT GGACGCGAGC GGCTCCGCGC AGGCCCAGGG CGTCTCGACG TACTACTACG GCCACGCGCG AGGCTCGTCG GCGGTCGGTG AGCGCTTCGC CGCCCTGGTG CAGCGTGAGA TCGTCTCGCG GACCGACATG GTGGACTGCC GTGCCCATCC CAAGACCTGG GAGCTGCTCC GCCGAACCAG AATGCCCGCC GTCCAGATCG ACCTCGGCTA CCTCAGCAAC ACTCACGACG CCGCCGCGCT GGCGTCGACC GAGTTCCGGG CCGCCGTCGC GGAGGGCCTG CTCGCCGCCA CACAGCGCCT GTTCCTGCCG CCGGAGCAGG ACCCGCCGAC GGGGCAGCTG CGCGTCCCGC GCATCGCGGC GCGAGCCTGA
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Protein sequence | MKLLRLGDRD PSVAEARAAF IHLGFLPVAP RQTDAADGPG PGALETSTAT GTGPSPAGDA GNGGPVDATD QFDNELDNAV RAFQQSRGLS VDGIIGPDTF RAIEEARRRL GDRLLHYSVT HPFVGDDVAA LQERLSNMGF DVGRADGIFG ARTDSAVRDF QRNRGLDPDG LCGPRTLREL KRLERTVTGG RPDVLRESMR LLARGPSLLG MVVAIDPGHG GDDLGVSSGG LCERDLMADL ASRLEARLLA SGLEAYPVHG PHESPPEAER AARANEIGAD LLVSLHVDAS GSAQAQGVST YYYGHARGSS AVGERFAALV QREIVSRTDM VDCRAHPKTW ELLRRTRMPA VQIDLGYLSN THDAAALAST EFRAAVAEGL LAATQRLFLP PEQDPPTGQL RVPRIAARA
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