Gene Franean1_7320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7320 
Symbol 
ID5675621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8948901 
End bp8950331 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content74% 
IMG OID641246157 
Productmajor facilitator transporter 
Protein accessionYP_001511545 
Protein GI158319037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.38056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.447394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTGGA CCGGCAACCT GCGCGCGCTG CTCGGCGGTC GCGCGTTCCG GCAGCTCTAC 
GCGTGCCGCC TGACGTCACA GGCCGCCGAC GGCGTGTTCC AGGCGAGCCT CGTCAGCTAT
GTGCTGTTCT CCCCGGAGCG CGCGACGTCC GCCGGGGCAC TGGCCGCGTC TCTCGCCGTG
GTCGTGCTGC CGTTCAGCGT CATCGGGCCG TTCGCCGGCA TCGTGCTGGA CCGGGTCTCC
CGCCAGCGGG TACTCGTTGT CTCCTCTGTG GTCCGCACGC TGCTGATGAT CGTGCTCGTC
GGCCTGATCC TCGGCGGGCG CACCGGCGCC GACTTCTACG CGACGGCGCT GGCCTCGGTG
AGCGTGAACA GGTTCGTCCT GGCAGCGCTG TCCGCAGGCC TCCCGATGGT CGTCAACGTC
GACCGGCTCG TGACGGCCAA CGCCCTGTCG GTCACCTCCG GAACTGTCGC CACCCTGGTC
GGGGCCGGTG TCGGCAGCGG GCTGCGCGGC CTCACCGACG GCGATGACCG GGCCGTCGCG
CTGGTGGCGG GCCTGGCGGC CCTCGCCTAC ATCGTCGCCG CCGTCACCGC GGCACGCCCC
GCCCGCCTCG CCTTCGGCCC GGTCGAGACG ATGCCCTGGC AGGGTGCCTG GTCGCAGGCC
CGGCACGTTG TCGCCGACAT GGTGGACGGC GTCCGTTACC TGTGGAACCA CGGCCCCGCC
CGGCGCGCGC TCGCCGCGCT GACGACGTCC CGCGCCGCCT ACGGGCTGGT GCTCGTCATG
ACGGTACTGC TGTACCGCAA CCACTTCACC GGGCCCGGCG GGGGGCTGGC CGGGCTCGCG
GCGGTGGTCG CGGCGAGCGG CGCGGGGACG ATCCTCGCCG CCGTCGTCAC CCCCCGGGTG
ACCCGGCGGA TGCCGAAGGC CACCTGGATC GCGATCGTCC TCGGCGCGGG CGGAGTCGTC
GAGGTGGTCC TGGGGCTGCC GTACCTCTCC CCGCTGTACA TCACCGCCGG GTTGCTCCTC
GGTTTCTCCG CGCAGGCGAG CAAGATCTGC GTCGACACGA TCGTGCAGGA GGAGACCCAC
GACGCCTACC GGGGGCGGGC GTTCTCCCTC TACGACCTGC TGTTCAATGT GGCCTTCGTG
GCCGCGGCCG CGGTCGCCGC GGTGGTGGTT CCGGAGGACG GGAGGTCCTC GCCGACCATC
ATCGCCGCGG GCATCGGCTA CAGCCTGGCG GGCCTCCTCT ACTACCGGGC CGCCATGCGC
CACCCCGAGG ACCGGATGAT CCGCGGCGTC GGCGAATCCC GCGCCGACAC ACCCGCCTCC
TCCGACGCCC CCGGCCCGAC CATGAGCCCG AGCCCGAGCC CGAGGCCAAC CTCGGGCCCA
GGCCGACCTG CGGGCCCGGT CTCAGCCACC GGGCCGGGCC CGGCCCGGTG A
 
Protein sequence
MAWTGNLRAL LGGRAFRQLY ACRLTSQAAD GVFQASLVSY VLFSPERATS AGALAASLAV 
VVLPFSVIGP FAGIVLDRVS RQRVLVVSSV VRTLLMIVLV GLILGGRTGA DFYATALASV
SVNRFVLAAL SAGLPMVVNV DRLVTANALS VTSGTVATLV GAGVGSGLRG LTDGDDRAVA
LVAGLAALAY IVAAVTAARP ARLAFGPVET MPWQGAWSQA RHVVADMVDG VRYLWNHGPA
RRALAALTTS RAAYGLVLVM TVLLYRNHFT GPGGGLAGLA AVVAASGAGT ILAAVVTPRV
TRRMPKATWI AIVLGAGGVV EVVLGLPYLS PLYITAGLLL GFSAQASKIC VDTIVQEETH
DAYRGRAFSL YDLLFNVAFV AAAAVAAVVV PEDGRSSPTI IAAGIGYSLA GLLYYRAAMR
HPEDRMIRGV GESRADTPAS SDAPGPTMSP SPSPRPTSGP GRPAGPVSAT GPGPAR