| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7308 |
|---|
| Symbol | |
|---|
| ID | 5675609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8932112 |
|---|
| End bp | 8933470 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641246145 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_001511533 |
|---|
| Protein GI | 158319025 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.036629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0750337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGTCG CCGACATCGC GCGCGGGCCT GGATCCGCGG TCGAGTTCGA TCGCACCCCG
CCCCACGATC TTCCTGCGGA GCAGAGCGTG CTGGGGGGCA TGCTGCTCTC GAAAGACGCG
ATCGCGGACG TCGTCGAGGT CCTCCGGGCG AGCGACTTCT ACCGGCCGGC GCACGCCACC
GTCTACACCA CGATCGGCGA CCTCTACGGC CGTGGGGAGC CGGCCGACGT CATCAGCGTC
GCGGCCGAGC TGGGCCGGCA GAACCTGCTG GAGCGGGTCG GCGGGCCGGC CTACATGCAC
ACGCTGATCT CCAGCGTCCC GACCGCGGCG AACGCCGGCT ACTACGCGCG CATCGTCGCG
GAGAAGGCCG TGCTGCGCCG GCTGGCCGAG GCCGGCACGC GCATCGTGCA GCTCGCCTAC
GGCCCGGCGC CCGACGTCAC CGACGTCGTC GACCGGGCCC AGGCGGCCGT CTACGAGGTG
ACCGAGCGGC GCACGAACGA TGACTACACC CCGCTCGGCG AGTTGCTGAA CCCGGCGCTG
GAGGAGATCG AGGCGATCCA GGCCCACGAC GGCGCCCTGA CCGGGGTGCC GACGGGGTTC
ACCGACCTCG ACGAGCTCAC CAACGGCCTG CACGGCGGCC AGCTGTGGAT CGTCGCGGCC
CGGCCCGCGG TCGGCAAGTC GACCCTGGGC CTGGATTTCG CCCGCGCCGC GTCGATCAAG
AACGGGATGA CCTCGGTCGT CTTCTCGCTG GAGATGAGCC GCATGGAGAT CACCATGCGG
CTGCTCTCCG CCGAGGCCCG GGTGTCGCTG CAGAACATCC GCACCGGTCG GCTGACCGAC
GACGACTGGG GTCGGCTGGC CCGGCGGATG GGGGAGGTCG CCGAGGCACC GCTGTACATC
GACGACAGCC CGCACCTGAC GATGATGGAG ATCCGGGCGA AGGCGCGGCG GCTCAAGCAG
CGCAACGACC TGCGGCTGGT CATCCTCGAC TACCTGCAGC TGATGTCCTC GCCGAAGAAG
GTCGAGAGCC GCCAGCAGGA GGTCAGCGAG ATCTCCCGGT CGCTGAAGCT GCTCGCGAAG
GAGCTGGAGG TCCCCGTCGT GGCCATCTCG CAGCTCAACC GGGCCTCCGA ACAACGGGCC
GACAAACGGC CCCAGGTCTC CGACCTGCGC GAGTCCGGCA GCCTCGAGCA GGACGCCGAC
GCGGTCATCC TGCTCTACCG GGAGGACACG GTGGAGAAGG AGTCCGCGCG GGCCGGCGAG
GCCGATCTGA TCATCGCCAA GCACCGTAAC GGCCCCACAG GCACCGTCAC GGTCGCCTTC
CAGGGCCACT ACTCCCGGTT CGTCGACATG GCCAACTGA
|
|---|
| Protein sequence | MSVADIARGP GSAVEFDRTP PHDLPAEQSV LGGMLLSKDA IADVVEVLRA SDFYRPAHAT
VYTTIGDLYG RGEPADVISV AAELGRQNLL ERVGGPAYMH TLISSVPTAA NAGYYARIVA
EKAVLRRLAE AGTRIVQLAY GPAPDVTDVV DRAQAAVYEV TERRTNDDYT PLGELLNPAL
EEIEAIQAHD GALTGVPTGF TDLDELTNGL HGGQLWIVAA RPAVGKSTLG LDFARAASIK
NGMTSVVFSL EMSRMEITMR LLSAEARVSL QNIRTGRLTD DDWGRLARRM GEVAEAPLYI
DDSPHLTMME IRAKARRLKQ RNDLRLVILD YLQLMSSPKK VESRQQEVSE ISRSLKLLAK
ELEVPVVAIS QLNRASEQRA DKRPQVSDLR ESGSLEQDAD AVILLYREDT VEKESARAGE
ADLIIAKHRN GPTGTVTVAF QGHYSRFVDM AN
|
|---|
| |