Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7303 |
Symbol | |
ID | 5675604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8924909 |
End bp | 8926108 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641246140 |
Product | hypothetical protein |
Protein accession | YP_001511528 |
Protein GI | 158319020 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0723048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGA GGACACCGGC TACCGCCCCG GAGACGATTC CCGTGCCCGG CAGGCAGCCG CATCCCGCCA CGGCCACCGA CGGGTCCGAC CCGTCGGGCG GGCCCGACAA ACCCGCCCGA ACGGACCAGA CCCCGCAGAT CACCGTGGAC CGCCACCTCA CCGCCGCCGA ACGGCACGCC TCGCTCGCCG CGGACATGCG CGCCGGCCTG ACCTCCCACC CTCGTGAGCT GCCACCCAAG TGGTTCTACG ACGCCACCGG CAGCCTGCTG TTCGACCGGA TCACCCGCCT GCCCGAGTAC TACCCGACCC GCCGCGAGCA CGCGGTGCTC ACCGCGCACG CCGCCGAGAT CGCCGCCGTC TGCCCGGCCG GCACCCTCAT CGAGCTCGGC TCCGGCACCT CGGAGAAGAC CCGCCTGCTC CTCGACGCGC TGCGCGCCAC CGGGGTGCTA CGCCGCTTCG TCCCCTTCGA CGTGGACGAG GAGACCCTGC TCCAGGCCGG ACAGGACATC CTGCGGGCGT ATCCGGGAAT CTCGGTGCAC GCGGTGGTCG GGGATTTCGA GCGCCACCTC GGCCTTCTCC CCGGCGCCCG GCCCGCCGCG GACACGGGCG CGGCGGCGGG CGCCGGTGCT GCCGGCGCTG ATGGCGGCGC TGCCGGTGTT GATGGCGGCC ACGGTGGAGG CCGCGACGAC CGGCGGCTTG TGGCCTTCCT CGGCGGAACC ATCGGCAACC TGCGGCCCGC GGCGCGCGCC GCCTTCCTGC GCGCCCTGAG CAACCAGTTC ACCGACGGCG ACGCCCTGCT CCTCGGCGCC GACCTGGTGA AGGACCCGCG ACGCCTCGTC GCGGCCTACG ACGACAGCGC CGGCGTGACA GCCGCCTTCA ACCGCAACGT TCTCTCAGTG ATCAACCGGG AGCTGGGGGC CGACTTCGAC CTGCGCGGGT TCGCCCACGT CGCCGCCTGG GACGCGGAGA ACTCCTGGAT CGAGATGCGC CTGCGCAGCG TCCGCGAGCA GGAGGTCGGG GTCCGCGCCC TGGACCTGGT CGCCCGCTTC GACGCCGACG AGCAGATGCG CACCGAGATC AGCGCCAAGT TCACCCTCGA CGCGATCGCC GCCGAGCTGG CCGCGGCCGG ACTCTCCGTC AGCCACCAGT GGACGGACCC AGACGGCGAC TTCGCCCTGA CCCTGGCCGT CCCCTCCTGA
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Protein sequence | MTSRTPATAP ETIPVPGRQP HPATATDGSD PSGGPDKPAR TDQTPQITVD RHLTAAERHA SLAADMRAGL TSHPRELPPK WFYDATGSLL FDRITRLPEY YPTRREHAVL TAHAAEIAAV CPAGTLIELG SGTSEKTRLL LDALRATGVL RRFVPFDVDE ETLLQAGQDI LRAYPGISVH AVVGDFERHL GLLPGARPAA DTGAAAGAGA AGADGGAAGV DGGHGGGRDD RRLVAFLGGT IGNLRPAARA AFLRALSNQF TDGDALLLGA DLVKDPRRLV AAYDDSAGVT AAFNRNVLSV INRELGADFD LRGFAHVAAW DAENSWIEMR LRSVREQEVG VRALDLVARF DADEQMRTEI SAKFTLDAIA AELAAAGLSV SHQWTDPDGD FALTLAVPS
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