| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7302 |
|---|
| Symbol | |
|---|
| ID | 5675603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8924122 |
|---|
| End bp | 8924865 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641246139 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511527 |
|---|
| Protein GI | 158319019 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR03442] conserved hypothetical protein TIGR03442 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0311318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCGTC ACCTGGCCTG GCTCGGTGCC CCGCGCACGC TCGCGGCGCT GACCCTCGAC
CGGCCGTCCA GCCTGCTGCG CCAGTCGTGG GCGCCCCGCC GGATGCGGCA CGGGACCGTC
AACGCCGACG GCTTCGGTGT CGGCTGGTAC GCGCCCGGCC TGCGCCCCGA ACCCGCCCGC
TACCGGCGCG CGGTGCCGAT GTGGACGGAC GCCTCCTACA GCTCGTTCGC CGGCGCCGTG
ACCTCGGGAT GTGTGCTTGC CGCGGTGCGC AGCGCCACCG TCGGGATGCC CGTCGAGGAG
ACCGCGACCG CCCCCTTCAC CGAAGGCCGG CTGCTGCTGA GCCACAACGG GCGGGTGCCC
GCCGACGGCG CGCTGCGGGA GCTGGCGGCC CGGCCCGGCG CGCCGGTGCC GGACTCCCGC
TGCGACTCGG CCATCGTGGC CGCCCTGCTG TGGGAGAGCG CGTCCCGGTT GCCACTGCCG
CGGGCCGTGG CGGACGTCGT CCTGACGCTG GGCGGGCTGC GCGAGCCGGA CGGGACGCCG
TCCCGGCTGA ACCTGCTGGT GACCGACGGC ACGCAGCTCG TGGCGAGCAC CTGGCGGGAC
ACCCTCAGCT ACCGCGAGGA GGTGGACGGG ATCGTCGTCG CCAGTGAGCC AGATGATGAC
GAATCCGATT GGGTCGACGT ACCGGACCAA TATCTCCTGG TGGCCGACAC ACACAAAGTT
ACTCTTAGTA GTTTGATCTC TTAG
|
|---|
| Protein sequence | MCRHLAWLGA PRTLAALTLD RPSSLLRQSW APRRMRHGTV NADGFGVGWY APGLRPEPAR
YRRAVPMWTD ASYSSFAGAV TSGCVLAAVR SATVGMPVEE TATAPFTEGR LLLSHNGRVP
ADGALRELAA RPGAPVPDSR CDSAIVAALL WESASRLPLP RAVADVVLTL GGLREPDGTP
SRLNLLVTDG TQLVASTWRD TLSYREEVDG IVVASEPDDD ESDWVDVPDQ YLLVADTHKV
TLSSLIS
|
|---|
| |