| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7298 |
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| Symbol | |
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| ID | 5675599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8917436 |
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| End bp | 8919526 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641246135 |
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| Product | Type IV secretory pathway VirB4 protein-like protein |
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| Protein accession | YP_001511523 |
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| Protein GI | 158319015 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.910736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0433123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCC GCCCGCCCGC GGTGGGGGGC GACGCCGCCT GGGGCGACCC GATCCGCTAC
GACGCCCCTG GTAGCGGCGC CGGCGCGAGC GACGACTACG ACGCGGGCTA CGACTACGAC
GACGACGACG CCGACCAGAT CGACCCGGGC CATGATCCCG GCCGCGACGC CGACGGGTTC
GTTGACCTCG GCGGCAGCCC GCGCACCCGC CGCCGGGGCG CGAAGGCCGC GGCGGCGCAC
GACCGCCGGT CGCGGCGAGC CGAGCGGGCC GCGGCCAACG CCGAACGGGC CGCGATGCGC
CGCGCGCAGG CCGCCCTGCG CCGCGGCGCG CAGCCCCCGA AGCTGCTCGG CCCGTTCGCC
GGACGGGCGT ATCACAAGCT GCGCCTGCCA GCCCATATGG AGACCACGGC CCAGATCGCC
GGGATCTATC CGTTCGTCGT CGACTCCGGG CTCGACGCGC CCGGCATGTA CATCGGCCGG
CATGTCTGGT CGGGCAACTC GTTCGACTTC GATGTCTTCG AGCTCTACCG GCAGCAGGTA
ATCGAGAACC CGAACTTCGC GGTGTTCGGG GCCGTCGGCT CCCGCAAGTC CGCGCTGCTG
AAGACGCTGA TCTCGCGGGG TTCGGCCTTC GGGTACCAGG CCGCTGTCCC CTGTGACCCG
AAGGGTGAGT ACACCCGGCT CGCGCGCCGG CTCGGCTGCG AGCCGACATA CATCGGGCCC
GGCATGTCCA CCCGGCTCAA CCCGCTGGAC GCCCCTCCGC GCCCGCGCGG CATCGCGGAC
GCCGACTGGG CGCGCGAGGT GAAGCGGGCG CGTTCGTCCC TGCTCTCGTC ACTGATCGAG
ACCGCGAAGG GGGTACCGCT CACCCCGGCC GAGCACACCG CCGTCGATCT CGCGCTGGAC
GTCGTCACCC GGCAGATCAC CGGCGCGACA CCGGACCGCT GGGCCACCCC TCTGCTCCCG
CACGTCCTCG AGGCGATGAC CGACCCGAGC GAGGAGGACT GCTCGGCGCT GCCGATGACG
GCCACCGAGC TGCGCGACGC GTCCAGGGAC GCGACGCTGA CCCTGCGCCG GCTCACGCAC
GGTGCTCTCG GTGGTCTCTT CGACGGCCCG ACGACGTCCC CGTTGGACTT CGACCGGCCG
ATCGCGGTGC TGAACCTGGA GCGGGTCCAG GGCAGCGACG AGATGATCGC GCTGATCATG
ACCTGTGCGC AGGCATGGAT GGAAGCCGCG CTGATGCGCC AGGACGGCGT GCAGCGCTAC
GTGGTCTACG ACGAGTGCTG GCGGCTGATG CGCTTCGCCG GACTGGTCCG CCGGCTGTCG
GCCCAGCAGA AGCTGGCGCG TCAGTGGGGC TGTGCCAACG CGATCGTGGC GCACCGCATC
TCCGACCTGC TCTCAGCCTC CCCCGACTCG GTGGAGATCG CCAAGGGCCT GCTCGCCGAG
ACCGCGATCC GCATCCTGTA CAAGCAGGCG TCCGACCAGA TCGCGGACAC GCAGGAGGCC
CTCGGGCTCA CGGACGTGGC CGCCGATCTG CTCCCCCGCC TGGACCCGGG CTACGCGCTG
TGGCTGATCC AGAACCGCGC CTTCTACGTC GAGCACGTCG TCGGCGACCT GGAGATCCCG
GTCGTCCTCA ACGGCTCGAA GATGCACGGC GAGGTCGACG ACACCAACCT CGTGCCGGAC
GACCTGGACC CCAGCGAGCT CGACCCGCCC GAGCTCGCCC CCCGCGCGTG GACCGACCCC
CCGGGGCCAC CGGCCTTCGT GCGGCGGGCC GCCGCCCCGG CGCTGGAGAC CGGACATCCG
CTGGGAGACC CGCCGCCGGG CACGCCCGCC GGCGACCGGC CCGGCCCGGG CAGCGGCCAC
CACGACGGCG GTCACCACGA CGGTGGCTAC CACGACAGTG GCTACGGGTA TGGGCACGAC
CCGGCGGAGG AGGTCGAGGA GAACCTCGTC GCCGAGCAGC CGCGCTGGTC CGCGCCCCCG
CTCGCCGGGG ACGGCTTCCA CCACATCCAG GTGGGCGATC CGCACATCAT CGACTCGCCG
CCGCACCACG GCCGCGGCGG CCGCACGAGC GGGCCCGACA CCGCCGGCTG A
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| Protein sequence | MTSRPPAVGG DAAWGDPIRY DAPGSGAGAS DDYDAGYDYD DDDADQIDPG HDPGRDADGF
VDLGGSPRTR RRGAKAAAAH DRRSRRAERA AANAERAAMR RAQAALRRGA QPPKLLGPFA
GRAYHKLRLP AHMETTAQIA GIYPFVVDSG LDAPGMYIGR HVWSGNSFDF DVFELYRQQV
IENPNFAVFG AVGSRKSALL KTLISRGSAF GYQAAVPCDP KGEYTRLARR LGCEPTYIGP
GMSTRLNPLD APPRPRGIAD ADWAREVKRA RSSLLSSLIE TAKGVPLTPA EHTAVDLALD
VVTRQITGAT PDRWATPLLP HVLEAMTDPS EEDCSALPMT ATELRDASRD ATLTLRRLTH
GALGGLFDGP TTSPLDFDRP IAVLNLERVQ GSDEMIALIM TCAQAWMEAA LMRQDGVQRY
VVYDECWRLM RFAGLVRRLS AQQKLARQWG CANAIVAHRI SDLLSASPDS VEIAKGLLAE
TAIRILYKQA SDQIADTQEA LGLTDVAADL LPRLDPGYAL WLIQNRAFYV EHVVGDLEIP
VVLNGSKMHG EVDDTNLVPD DLDPSELDPP ELAPRAWTDP PGPPAFVRRA AAPALETGHP
LGDPPPGTPA GDRPGPGSGH HDGGHHDGGY HDSGYGYGHD PAEEVEENLV AEQPRWSAPP
LAGDGFHHIQ VGDPHIIDSP PHHGRGGRTS GPDTAG
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