Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7242 |
Symbol | |
ID | 5675543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8844667 |
End bp | 8845410 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641246079 |
Product | nuclear export factor GLE1 |
Protein accession | YP_001511467 |
Protein GI | 158318959 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00784654 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.281308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCA CCATCCGCAC AGCCCGGCTC CGCCGTGGGG TCCTGTGCGC GCTCGCCGCC GCGGCGGGCA CCATCGCGCT CGCCGTGCCG GCGTCCGCAC ACGTCACCGT GTCGCCGGCG GAGGCGGCCG CGGGCGGCTA CGCGACCCTG TCGTTCAAGG TGCCGACCGA GAGCGACACG GCGTCCACCA CCGGGATCGA CGTGCAGTTC CCGACCGACG CGCCGATCGC GTCGGTCACC GTCCAGCCCA AGCCCGGCTG GACGTACAAG GTCACCAAGG GCGCGCCGCC GGCGCCGCTC ACCGTGCATG GCAGCCAGGT CAGCGAGATC GTCACCCGGA TCACCTGGAC GGCGCAGGAC GGCGGCGGCA TCAAGCCGGG CGAGTTCGAC ACCTTCAGCG TCTCGGCCGG CCCGCTGCCG GAGAAGGGCG ACCAGGTCGT CTTCAAGACC TTGCAGACCT ACTCGGACGG CGAGGTTGTC CGCTGGGTCG ATGTCGCGGC GGCGGGTGCC GCCGAGCCGG AGCACCCGGC GCCGACGGTC ACGCTGACCG CCGCCGCGGC AGCCGGCCAC GACGACGACG GTGACGGCGA CGACACCGCC AGCATCGAGT ACACGGCCGC CACGGAATCG GACTCCACGT CGGACGGCAC GGCGCGCGCG CTCGGGATCA CCGGGCTCGT GCTGGGAGTC CTCGGGCTGG CCGCCGGGGC CTTCGCACTG ATCACGACCC GCCGGCGGGC CTGA
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Protein sequence | MSRTIRTARL RRGVLCALAA AAGTIALAVP ASAHVTVSPA EAAAGGYATL SFKVPTESDT ASTTGIDVQF PTDAPIASVT VQPKPGWTYK VTKGAPPAPL TVHGSQVSEI VTRITWTAQD GGGIKPGEFD TFSVSAGPLP EKGDQVVFKT LQTYSDGEVV RWVDVAAAGA AEPEHPAPTV TLTAAAAAGH DDDGDGDDTA SIEYTAATES DSTSDGTARA LGITGLVLGV LGLAAGAFAL ITTRRRA
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