Gene Franean1_7242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7242 
Symbol 
ID5675543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8844667 
End bp8845410 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID641246079 
Productnuclear export factor GLE1 
Protein accessionYP_001511467 
Protein GI158318959 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00784654 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.281308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CCATCCGCAC AGCCCGGCTC CGCCGTGGGG TCCTGTGCGC GCTCGCCGCC 
GCGGCGGGCA CCATCGCGCT CGCCGTGCCG GCGTCCGCAC ACGTCACCGT GTCGCCGGCG
GAGGCGGCCG CGGGCGGCTA CGCGACCCTG TCGTTCAAGG TGCCGACCGA GAGCGACACG
GCGTCCACCA CCGGGATCGA CGTGCAGTTC CCGACCGACG CGCCGATCGC GTCGGTCACC
GTCCAGCCCA AGCCCGGCTG GACGTACAAG GTCACCAAGG GCGCGCCGCC GGCGCCGCTC
ACCGTGCATG GCAGCCAGGT CAGCGAGATC GTCACCCGGA TCACCTGGAC GGCGCAGGAC
GGCGGCGGCA TCAAGCCGGG CGAGTTCGAC ACCTTCAGCG TCTCGGCCGG CCCGCTGCCG
GAGAAGGGCG ACCAGGTCGT CTTCAAGACC TTGCAGACCT ACTCGGACGG CGAGGTTGTC
CGCTGGGTCG ATGTCGCGGC GGCGGGTGCC GCCGAGCCGG AGCACCCGGC GCCGACGGTC
ACGCTGACCG CCGCCGCGGC AGCCGGCCAC GACGACGACG GTGACGGCGA CGACACCGCC
AGCATCGAGT ACACGGCCGC CACGGAATCG GACTCCACGT CGGACGGCAC GGCGCGCGCG
CTCGGGATCA CCGGGCTCGT GCTGGGAGTC CTCGGGCTGG CCGCCGGGGC CTTCGCACTG
ATCACGACCC GCCGGCGGGC CTGA
 
Protein sequence
MSRTIRTARL RRGVLCALAA AAGTIALAVP ASAHVTVSPA EAAAGGYATL SFKVPTESDT 
ASTTGIDVQF PTDAPIASVT VQPKPGWTYK VTKGAPPAPL TVHGSQVSEI VTRITWTAQD
GGGIKPGEFD TFSVSAGPLP EKGDQVVFKT LQTYSDGEVV RWVDVAAAGA AEPEHPAPTV
TLTAAAAAGH DDDGDGDDTA SIEYTAATES DSTSDGTARA LGITGLVLGV LGLAAGAFAL
ITTRRRA