| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7238 |
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| Symbol | |
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| ID | 5675539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8838299 |
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| End bp | 8838688 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641246075 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_001511463 |
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| Protein GI | 158318955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0390041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.160628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGGCT TCAAAGAGTT CCTGCTGCGG GGGAACGTCG TCGACCTCGC GGTCGCCGTC
GTGATCGGCA CCGCCTTCAC CGCGGTGGTC ACGTCGCTGG TCGCGAACCT CTTCACCCCG
CTCATCGCCG CGATCATCGG GAAGCCGGAC TTCGCACAGC TCACCTTCAC GATCAACAAC
AGCGTCTTCT ACTACGGTCG ATTCCTGAAC AGCCTCATCG CGTTCCTCTC GATCGCCGCG
GTGATCTACT TTGTCGTGGT CGCACCGGTC AGCAGGATCA ATGAGCGGCG ACGGCGCGGC
CAGACGTCCC CGCTGGACGA TCCGACGCTC ACGGACGAGA CCCGGTTGCT GACCGAGATC
CGGGACCTGC TGGCGGCCGG GCGACGGTGA
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| Protein sequence | MKGFKEFLLR GNVVDLAVAV VIGTAFTAVV TSLVANLFTP LIAAIIGKPD FAQLTFTINN
SVFYYGRFLN SLIAFLSIAA VIYFVVVAPV SRINERRRRG QTSPLDDPTL TDETRLLTEI
RDLLAAGRR
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