Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7236 |
Symbol | |
ID | 5675537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8834748 |
End bp | 8835965 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641246073 |
Product | putative LpqP (hydrolase/esterase) |
Protein accession | YP_001511461 |
Protein GI | 158318953 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0397136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.31443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCCG CCCGCAGCCG CCGCTTCGTC GCGGTACGGC TTCTCATGTC CTTGCTCGCG GCATTGCTGG TCGTGGCCGG GTGCGGGCTC GCGGGCGGTG CCGGGCCAAG TGCCCGGCCC GGCCCGACGA GCGACGAGGG GACCATCCCC ACCCCGCCGC CGACGATCGG TCCCGATGCC TTCGAGCAAA GTGGACGGGG TGGTCAGATC CGGCTGACGC TGCCGGACAC GGGCACGCCG GGGCCGTACC CGCTGGTCGT GGCGCTGCAC AGCCTGTACC ACGATGGCAC CGAGCCACAG CGCGGCTGGG GGCTCGACGC GCTCGCCCGG TCGGCCGGCT TCGCGGTCGT CTACCCCGAC GGGCTGGGGA TGTCCTGGAA CGCGGGCACC TGCTGCGGCC CGGCCGCGGC CGCCAGCAGT GACGACGTCG GCTGGCTGCG TTCACTCATC GCGCACCTGG AGAGCAGGTA CCCGATCGAT CCGCGCCGGG TCAGCATCAT CGGGCTGTCG AACGGCGGCA TGCTCGCCTA CCGCTACGCC TGCGAGCACG GGGACGAGCT CGCCGGGTTC GCGGTCGTCG CCGCCAGTCT GCAGACCTTC AACTGCACTC CGCCCGCGCC CGTAACCATG GTGTCGGTGC ACGGCGGAAT GGACGGCCAC GTCCCGTACG CCGGCGCGCT GTGGTCCGAG GCCCTGCAGA CGGGGATCAC GCCCGTCGAG GTGAGCCTCG CCCCGTTCCG GGCGGTGGAC GGCTGCCCGT CACCCACCCA GCCCGCCGAC ACCACGACCA CCGGCGCGGA CGGCCGTCCG ATCGGCGCGA CCGGAGCCCA GGTCGGGGCG GTGGACCCGG CCGGGTCCGG CACCGCCGGG CCAGCCGACC CGGCGATCAT CGCCGCCGCC GGCCCCGGGC TGCTGCCCGC CACCACACCG CCGGCGGCCG GCCAGGCACC GCTCGGCCAG GCACCGCTGG GGCAGCCGCC GGCGACGGGA CCGGGCGCGC CCGCGGCCCA GCCGCCCGCG CCGCCCGTCC AGGCGCCGCC GGTGGCCGTC CGGCACGAGA CGACCTGTTC GACGTCCGCC CGCCTCGTGC AGTACGTGCT GCCGGCGCTG GGGCACGGCT GGCCGCCGCT GACCGGCGCC GGCTCCTTCG ACACGGCCGC CGTGCTGTGG GAGCTGCTGG GGCCGGCCCG CTCGGCCACC GCCGGCCCCC GGATCTGA
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Protein sequence | MSAARSRRFV AVRLLMSLLA ALLVVAGCGL AGGAGPSARP GPTSDEGTIP TPPPTIGPDA FEQSGRGGQI RLTLPDTGTP GPYPLVVALH SLYHDGTEPQ RGWGLDALAR SAGFAVVYPD GLGMSWNAGT CCGPAAAASS DDVGWLRSLI AHLESRYPID PRRVSIIGLS NGGMLAYRYA CEHGDELAGF AVVAASLQTF NCTPPAPVTM VSVHGGMDGH VPYAGALWSE ALQTGITPVE VSLAPFRAVD GCPSPTQPAD TTTTGADGRP IGATGAQVGA VDPAGSGTAG PADPAIIAAA GPGLLPATTP PAAGQAPLGQ APLGQPPATG PGAPAAQPPA PPVQAPPVAV RHETTCSTSA RLVQYVLPAL GHGWPPLTGA GSFDTAAVLW ELLGPARSAT AGPRI
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