Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7228 |
Symbol | |
ID | 5675529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8825235 |
End bp | 8826359 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641246065 |
Product | phosphoserine aminotransferase |
Protein accession | YP_001511453 |
Protein GI | 158318945 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACA CCCCGACGAT CGTCCTGCCG GAGTCACTGC GCCCGGTCGA CGGTCGGTTC GGCTGCGGGC CCTCCAAGGT CCGCACCGAA GCCGTGCAGG CTCTCGCCGC GAGCGGGGCC TCCCTCCTCG GTACCTCGCA CCGGCAGAAG CCGGTGAAGA ACCTGGTCGG ACGGGTCCGC GCCGGCCTGG CCGACCTGTT CTCCCTCCCC GAGGGCTACG AGGTGGTCCT CGGGATCGGC GGCGCCACCG CGTTCTGGGA CGCCGCCGCC TTCAACCTGG TGCGGGAGCG CTCCCAGCAC CTGGTCTTCG GCGAGTTCGG TGGCAAGTTC GCCGACACCA CCAAGGGCGC CCCGTTCCTG GCCGCGCCGT CGGTGGTCAA GTCCGAGCCG GGTACCCACC CGGACTGGGC TCCCGAGCCC GGCGTCGACG TCTACGCCAC GCCGCACAAC GAGACGTCCA CCGGCGTGGC CCGGCCGGTG CGCCGCCCCG TCGGCGCCGA CGCGGGCGCG CTGCACCTGG TGGACGCCAC CTCGGGCGCC GGCGGCCTGC CCGTCGACCT CACCGAGGTG GACGTCTACT ACTTCGCGCC GCAGAAGTGC TTCGCCTCCG ACGGTGGGCT CTGGGCGGCC CTGATGTCGC CGGCGGCGAT CGCCCGGCTC GGCGAGATCG CGGCGACGGA CCGCTGGATC CCGCCCTTCC TGGACCTGAC GACCGCGCTG GACAACAGCA CGAAGGACCA GACCTACAAC ACCCCGGCCG TGTCCACGCT GTTCCTGTTC GCCGAGCAGC TCGACTGGAT GCTGGGCAAC GGCGGCCTGG ACTGGTGTGT GCGCCGCACC GGAGAGTCCT CCTCGATCCT GTACAACTGG GCCGAGAAGA CGCCGTACAC GACGCCGTTC GTCACCGACC CGGCGCACCG CTCGCAGGTC GTCGTCACGA TCGACTTCGA GGGCGTCGAC GCCGCCGCGG TGGCCAAGGT GCTGCGCGCC AACGGCGTGG TCGACGTCGA GCCCTACCGC AAGCTGGGCC GCAACCAGCT CCGGGTGGCC TGCTTCCCCG CGGTCGAGCC GTCGGACGTC GAGACCCTGA CCAGCGCCAT CGACCACGTG GTCGAGCGCC TGTAG
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Protein sequence | MPDTPTIVLP ESLRPVDGRF GCGPSKVRTE AVQALAASGA SLLGTSHRQK PVKNLVGRVR AGLADLFSLP EGYEVVLGIG GATAFWDAAA FNLVRERSQH LVFGEFGGKF ADTTKGAPFL AAPSVVKSEP GTHPDWAPEP GVDVYATPHN ETSTGVARPV RRPVGADAGA LHLVDATSGA GGLPVDLTEV DVYYFAPQKC FASDGGLWAA LMSPAAIARL GEIAATDRWI PPFLDLTTAL DNSTKDQTYN TPAVSTLFLF AEQLDWMLGN GGLDWCVRRT GESSSILYNW AEKTPYTTPF VTDPAHRSQV VVTIDFEGVD AAAVAKVLRA NGVVDVEPYR KLGRNQLRVA CFPAVEPSDV ETLTSAIDHV VERL
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