Gene Franean1_7228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7228 
Symbol 
ID5675529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8825235 
End bp8826359 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content72% 
IMG OID641246065 
Productphosphoserine aminotransferase 
Protein accessionYP_001511453 
Protein GI158318945 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA CCCCGACGAT CGTCCTGCCG GAGTCACTGC GCCCGGTCGA CGGTCGGTTC 
GGCTGCGGGC CCTCCAAGGT CCGCACCGAA GCCGTGCAGG CTCTCGCCGC GAGCGGGGCC
TCCCTCCTCG GTACCTCGCA CCGGCAGAAG CCGGTGAAGA ACCTGGTCGG ACGGGTCCGC
GCCGGCCTGG CCGACCTGTT CTCCCTCCCC GAGGGCTACG AGGTGGTCCT CGGGATCGGC
GGCGCCACCG CGTTCTGGGA CGCCGCCGCC TTCAACCTGG TGCGGGAGCG CTCCCAGCAC
CTGGTCTTCG GCGAGTTCGG TGGCAAGTTC GCCGACACCA CCAAGGGCGC CCCGTTCCTG
GCCGCGCCGT CGGTGGTCAA GTCCGAGCCG GGTACCCACC CGGACTGGGC TCCCGAGCCC
GGCGTCGACG TCTACGCCAC GCCGCACAAC GAGACGTCCA CCGGCGTGGC CCGGCCGGTG
CGCCGCCCCG TCGGCGCCGA CGCGGGCGCG CTGCACCTGG TGGACGCCAC CTCGGGCGCC
GGCGGCCTGC CCGTCGACCT CACCGAGGTG GACGTCTACT ACTTCGCGCC GCAGAAGTGC
TTCGCCTCCG ACGGTGGGCT CTGGGCGGCC CTGATGTCGC CGGCGGCGAT CGCCCGGCTC
GGCGAGATCG CGGCGACGGA CCGCTGGATC CCGCCCTTCC TGGACCTGAC GACCGCGCTG
GACAACAGCA CGAAGGACCA GACCTACAAC ACCCCGGCCG TGTCCACGCT GTTCCTGTTC
GCCGAGCAGC TCGACTGGAT GCTGGGCAAC GGCGGCCTGG ACTGGTGTGT GCGCCGCACC
GGAGAGTCCT CCTCGATCCT GTACAACTGG GCCGAGAAGA CGCCGTACAC GACGCCGTTC
GTCACCGACC CGGCGCACCG CTCGCAGGTC GTCGTCACGA TCGACTTCGA GGGCGTCGAC
GCCGCCGCGG TGGCCAAGGT GCTGCGCGCC AACGGCGTGG TCGACGTCGA GCCCTACCGC
AAGCTGGGCC GCAACCAGCT CCGGGTGGCC TGCTTCCCCG CGGTCGAGCC GTCGGACGTC
GAGACCCTGA CCAGCGCCAT CGACCACGTG GTCGAGCGCC TGTAG
 
Protein sequence
MPDTPTIVLP ESLRPVDGRF GCGPSKVRTE AVQALAASGA SLLGTSHRQK PVKNLVGRVR 
AGLADLFSLP EGYEVVLGIG GATAFWDAAA FNLVRERSQH LVFGEFGGKF ADTTKGAPFL
AAPSVVKSEP GTHPDWAPEP GVDVYATPHN ETSTGVARPV RRPVGADAGA LHLVDATSGA
GGLPVDLTEV DVYYFAPQKC FASDGGLWAA LMSPAAIARL GEIAATDRWI PPFLDLTTAL
DNSTKDQTYN TPAVSTLFLF AEQLDWMLGN GGLDWCVRRT GESSSILYNW AEKTPYTTPF
VTDPAHRSQV VVTIDFEGVD AAAVAKVLRA NGVVDVEPYR KLGRNQLRVA CFPAVEPSDV
ETLTSAIDHV VERL