| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7204 |
|---|
| Symbol | |
|---|
| ID | 5675505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8796086 |
|---|
| End bp | 8797675 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641246041 |
|---|
| Product | carboxylesterase type B |
|---|
| Protein accession | YP_001511429 |
|---|
| Protein GI | 158318921 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2272] Carboxylesterase type B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.233652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAGG GTCCGGTGGT CTCCTTCTAC GGGCTTCCTT ACGCGGCGCC GCCGGTCGGT
GCGCTGCGCT GGAGGGCGCC CGCCCCGGCG GCCCCGTGGA GCGGCATGCG GGACGGCTCG
GCGCACGGCC ATCCATGCCC GCAGGAGGGA CCGCTGGCAG CCGGCGCCAG CGAGGACTGC
CTGTTCGTGA ACGTCACCAT GCCGGCGGAC GCGCCCCGGG CCACCGGGAC ACCGCCGCCG
GCCGCGGCCG GCGGCGGTAC TGGCGGCGCC ACTGGCGCTG GCGCTGGCAC CACTGGCGGC
AGCGGTGCGG GGCTGCCGGT GCTGGTGTGG ATCCACGGCG GCGGCTTTGT CGCCGGATCG
GCCAACGATG TGGACATGTC CGCGTTCGCG GCCGGCGGGC CCGCCGTGCT CGTGGGCGTC
AACTACCGGC TCGGCGCGCT CGGCCAGCTC GCGCTGCCGG CGCTGAACAC CGAGTCGGGC
GGCGACGCGG GCTCGTACTC CCTGGCGGAC ATCATCGCTG CGCTGCGCTG GGTGCGGGCG
AACGCCGCCG CCTTCGGTGG GGACCAGGGG AACGTGGCGA TCTTCGGAGA GTCCGCCGGT
TCTGTGAACG TCTGCGGGCT GCTGGCAGCG CCGTCCGCGC GCGGGCTGTT CCAGCGGGCG
GTCATGCAGA GCGGGCCGTG CCAGTGGTCG CTGCCGACCA TGACCACGGC CGAGGGCACG
GGCCAGCAGT TCGCCGCCCG AATGGGCTGT ACGGACCCCG CCGGGGTGCT CGACTGCCTG
CGGGCGCGGC CGGTGGAGCA GATCGTCGCC GGCTCCGGGC AGGCGGACAT CCTGACCGCT
CCGACCTGGG CGCCGGTGGT CGGCAGCCGG ACGCTGCCCC GCTTCCCGGT GGATGCCGTC
GCCGCCGGCT CGGCGGCGGG GGTACCGGTC CTCCTCGGGA CGGTGCGCGA CGAGGGGCGG
GCCTTCACCT CCAGCTACGA CTCCGGTGGG GAGCTCACCG CCGAACGGTT CGCGCAGATC
GTCCGGGCGG AGATCCCCGA CCGGGCGGAC GCTGTCCTCG CGGCCTACCC GCCGGGGGCC
GTCCCCGCCC GCGAGCGGCT CGCGCAGGTG ATCACCGACC GGGTCTTCGC CTGCCCGACC
GCGTACTCCG CTGACCTGTT CAGCCAGCCC CGCGGCCAGC CCGGGTCGGG GGCTGTCGTG
CCCGGGCGGG CGTTCCTGTA CGAGTTCGAC GTCCCGGGTC TCGGCCCGGT GACCGACGGC
GTGGCCACGG GAGCCACCCA CGCCGGGGAA CTGCCGTACC TGTTCCGCTC CGCCGCCTCG
GACGCGCCGC ACACGGGGGC GACCGCCAGC GAGCGCGCGC TGTCCGCGGC GATGGTCGAC
TACTGGGCAC GGTTCGCCGC CACCGGTGAT CCGAACACGC CTCCCGCCGG AGCCGTCGGT
GTGGAATCCG GGGAGCGGGT GCTGCCGGGC TGGCCGCCCT GGCCGGGGGA ATGGAACTCG
ACCGTTCCGG ACCGGCTGGC CCTCGAGCCA GGCGTGCTGC TTGCGCGGTC CGGCTACGCC
GTGGCGCACC ACTGCGACCT CTGGGGCTGA
|
|---|
| Protein sequence | MAEGPVVSFY GLPYAAPPVG ALRWRAPAPA APWSGMRDGS AHGHPCPQEG PLAAGASEDC
LFVNVTMPAD APRATGTPPP AAAGGGTGGA TGAGAGTTGG SGAGLPVLVW IHGGGFVAGS
ANDVDMSAFA AGGPAVLVGV NYRLGALGQL ALPALNTESG GDAGSYSLAD IIAALRWVRA
NAAAFGGDQG NVAIFGESAG SVNVCGLLAA PSARGLFQRA VMQSGPCQWS LPTMTTAEGT
GQQFAARMGC TDPAGVLDCL RARPVEQIVA GSGQADILTA PTWAPVVGSR TLPRFPVDAV
AAGSAAGVPV LLGTVRDEGR AFTSSYDSGG ELTAERFAQI VRAEIPDRAD AVLAAYPPGA
VPARERLAQV ITDRVFACPT AYSADLFSQP RGQPGSGAVV PGRAFLYEFD VPGLGPVTDG
VATGATHAGE LPYLFRSAAS DAPHTGATAS ERALSAAMVD YWARFAATGD PNTPPAGAVG
VESGERVLPG WPPWPGEWNS TVPDRLALEP GVLLARSGYA VAHHCDLWG
|
|---|
| |