| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7203 |
|---|
| Symbol | |
|---|
| ID | 5675504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8795202 |
|---|
| End bp | 8796122 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641246040 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511428 |
|---|
| Protein GI | 158318920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.1891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGG CCACGCGCGC TGCGGTGAAA TGGCCGGCGC ACCGGAGTGC GCCCCAGGTC
GAGCTGCGCA CCGACATCCC ACATTCCGCC CGGATGTACG ACTACTTCCT CGGCGGCAAG
GACAACTTCC CCGCCGACCG CGAAGCGGCC GAAGACCTGA TGGCCGTCTA CCCGGCCACC
AGGACGACGG CGTTACAGGG CCGGTCGTTC ATGACGAGGG CGATCCGCCA CCTGGCCCGC
GACGCCGGGA TACGCCAGTT CCTCGACATC GGGACGGGCA TCCCGGCCAG CCCCAACCTG
CACGAGACGG CACAGGCGGC CGCCCCCGCG GCTCGGGTCC TGTACGTCGA CAACGACCCG
ATCGTGCTGT CGCATGCTCG CGCCCTGCTG ACGAGCACCC CGCAGGGCCG GACGGCCTAC
CTGGACGCGG ACCTGCTCGA TCCCAGCAGG ATCATCCGTT CCGCCGAGCT GCGCGACACT
TTCGACCTCG ACCAGCCCGT CGCGTTGTCC CTGCTCTCGA TCCTGCACTT CGTGCCGGAC
GACCGGGACC CGGCGGGCAT CGTCCAGGAG CTGCTCGGGG CCCTCGCTCC GGGTAGCTAC
CTGGCTGTCG CCCACGCGAC CGGGGATTTC GTGGCCCCGG AGGTCGCCGA GCTCGGCACC
ACGATCTACC AGGACCGCGG GATCCCCTTC CAGCCCCGGT CCCGCGCCGA GATCACCGCG
TTGCTCGGCG GCCTCGAGCT GGTGGCGCCC GGGTTGGTCC CGGCCCACCG CTGGCAGCCG
GAGGACGGGT CGGCGGAGCT CACGGACGCC GAGGTCAGCA GCTACGGGGC GATCGCACGC
AAACCCGTGA ATCGCCCAGA CGGCAACAAT CACCAGGGCG CGGGTCAGCC CCAGAGGTCG
CAGTGGTGCG CCACGGCGTA G
|
|---|
| Protein sequence | MDEATRAAVK WPAHRSAPQV ELRTDIPHSA RMYDYFLGGK DNFPADREAA EDLMAVYPAT
RTTALQGRSF MTRAIRHLAR DAGIRQFLDI GTGIPASPNL HETAQAAAPA ARVLYVDNDP
IVLSHARALL TSTPQGRTAY LDADLLDPSR IIRSAELRDT FDLDQPVALS LLSILHFVPD
DRDPAGIVQE LLGALAPGSY LAVAHATGDF VAPEVAELGT TIYQDRGIPF QPRSRAEITA
LLGGLELVAP GLVPAHRWQP EDGSAELTDA EVSSYGAIAR KPVNRPDGNN HQGAGQPQRS
QWCATA
|
|---|
| |