| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7197 |
|---|
| Symbol | |
|---|
| ID | 5675498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8789630 |
|---|
| End bp | 8790811 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641246034 |
|---|
| Product | cellulase |
|---|
| Protein accession | YP_001511422 |
|---|
| Protein GI | 158318914 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCC GGGCGGAAGA CGGCAACGGG CCGAAGCCGC GGTTGCGCGA GCCTCAGGTC
CGGCCAGGTC GGCCAGGTCG CACCCGCCTC CGGCGCCGGG CCTGTGCCGC CGGGGCGACG
GTGGTCGCGG TGCTCGCCCT CGCCGCCTGC GGCGGGGGCT CGAGCCCCAC CCCGGTGACA
CCCAGCGTGA CCGCGGCCGC ACCGAACGTT CCCACCGGTC CGCTGACAGC GGTCGGACCG
CAATGCCCGG CCGGCGACCC GGCCGGCGCC CAGCGGCCGA CCGAGACCGT CGTGCCCGCC
GATCCCGCTC CCGCCGCGCC CTTCCTCGTC GACCACGGCA GCCAGGCGGC CGAGGAGGCG
CAGCGCAACC CCGCGCGCGC CCAGATCCTC GCGCCACTGG TCAACACCCC CACCGCCTAT
CCGGTCGGTG ACTGGCTGAG AGATGTGCCC GGCGAGGTCC ACAAGCGCGC CTCCGCGAGC
CGCGACACCG GCACGACCGC GACATTCATG ATCTATGCGA TTCCGCACCG TGACGCGGAG
GCCGTCTACT CCGCCGGTGG CCTGCCCAAC GCCGACGCCT ACCGGACGTT CACCCGCCAG
GTCGCCGGCG CGATCGGCGA CGCCCGCGCA GTGATCATCC TTGAGCCGGA CTCGCTCGGT
CAGATGGACA GCCTGCCCGC CGACCAGCAG GCCGAGCGCT ACGCGCTGCT CAACGACGCG
GTCGGCGTGT ACGGCGCGCT GCCCAACACC AGCGTCTACC TGGACGGCGC GAACTGCGGC
TGGATGCCGG CGGGAGCGGC GCCGGTGATC GCCGAACGGC TCCTGCGGGC CGGGGTGAAG
GGCGCCCGCG GCTTCGCGGT CAACGTGTCC AACTACTACC GGACCGAGGA CGAGACCGCC
CGAGGCGAGA TCATCTCGGC CCTGACCGGC GGCACCCACT TCGTGGTCGA CACCTCGCGC
AACGGCCGGG GCCCCGCCGA GGGCATCCAG AACCAGTGGT GCAACCCGCC GGACCGTGGC
CTGGGCGTCG CCCCGACGAT CGAGACGGGC TCACCGCACG CCGACGCGTT CCTCTGGATC
AAGACCCCTG GTGCCAGCGA CGGCGAGTGC GGACGCGGCA ACCCCGCGGC CGGCGCCTGG
TGGCAACAGC AGGCGGAGGA GCTGGTCCGC AATGCGGCCT GA
|
|---|
| Protein sequence | MTVRAEDGNG PKPRLREPQV RPGRPGRTRL RRRACAAGAT VVAVLALAAC GGGSSPTPVT
PSVTAAAPNV PTGPLTAVGP QCPAGDPAGA QRPTETVVPA DPAPAAPFLV DHGSQAAEEA
QRNPARAQIL APLVNTPTAY PVGDWLRDVP GEVHKRASAS RDTGTTATFM IYAIPHRDAE
AVYSAGGLPN ADAYRTFTRQ VAGAIGDARA VIILEPDSLG QMDSLPADQQ AERYALLNDA
VGVYGALPNT SVYLDGANCG WMPAGAAPVI AERLLRAGVK GARGFAVNVS NYYRTEDETA
RGEIISALTG GTHFVVDTSR NGRGPAEGIQ NQWCNPPDRG LGVAPTIETG SPHADAFLWI
KTPGASDGEC GRGNPAAGAW WQQQAEELVR NAA
|
|---|
| |