| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7196 |
|---|
| Symbol | |
|---|
| ID | 5675497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8787956 |
|---|
| End bp | 8789509 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641246033 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511421 |
|---|
| Protein GI | 158318913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.594351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCAGG TCTGCTGCCT AGCCATTGTC ATCGTGGCCG GGAACGGCCC GTTCCTCAGC
GCCTGGGCGA CCGACAAGTA CGACACCTGG CGCTCGCACC AGCCGGACTA CATGCGTCAG
TACGGCCGCT GGGACATCGT CGCCGACCCC GGTTCGCGCT CCATCCACGC GGCGCTGCTG
CGGACCGGGA AGATTCTGCT GCTGGCCGGT TCGGGAAACA ACCAGGCCAA CTTCGACGCC
AAGCGCTTCG AGACCCTGCT GTGGGACCCG ACCGCCAACA CCTTCGAGCA GGTCTACACG
CCGTGGGACG TCTTCTGCGC CGGCCAGGCG TTTCTTCCGA GCGGTGAGCT GCTCATCGCC
GGCGGCACGA AGAAGTACGA GGTCCTCGCC CAGGACTCGC CGGACGGCAA GAAGCAGGAG
TACCAGGGGC TGAAGGACAG CTACACGTTC AATCCGCAGA CGGAGCGGTA CGAGAAGACC
GGCGACCTGA ACTTCGCCAG GTGGTACCCG ACCCTGGTCA CGCTGGCCAG CGGCCAGGTG
GTCGCGGTCT CCGGCCTGAA CGAGAAGGGC GACATCGACC CAGGCAACAC GGAGTGGTTC
GACCAGGCGA ACCGGACGTG GAACCACAAC GAGGGGCTGG TCAAGGAGTT CCCGACCTAC
CCGTCGCTGC TGCTCGCCGG GGACGGCCGG CTGTTCTTCT CCGGCGCGAA CGCCGGTTAC
GGGCCGGCCT CGCTGGAAGC CCGCCAGCCC GGATTCTGGA GCCTCGCCGA CGGTACGTTC
CAGGCGGTTC CGGGCCTGCC TCAGCCGGAG ATCAACGAGA CCGCCGGAAC GGTGATGCTG
CCGCCGGCCC AGGAACAGCG GGTGATGTTC GTCGCCGGCG GCGGCGTCGG CGACACCCAG
GTGGCCACCG CCCGCACCGC GATCGTCGAC CTGGACGACC CGAATCCCCA TTACGTCCCG
GGGCCGAACA CCACTGTCGC GAAGCGGTAC CCCGGCGTCG TCGTCCTGCC GGACGACACC
GTGCTCGTCT CCGGCGGCTC CACCGCCTAC CGCCAGAAGG ACACCCAGAC GGCGGAGATC
TACCACCCGG ACACGAACAC CTTCACCACA GCCGCCGACC CGCTCGTCGG CCGGGACTAC
CACTCGAGCT ATCTACTGAT GCCCGACGGC CGGGTGGCGG TTTTCGGTTC CAATCCGCTG
AGCGACGACA ACTTCTTCGA GACCCGGATC GAGATCTACA GTCCGCCCTA CATGTACCAG
GGTGAGCGGC CGGTCATTAA GACCGCGCCG ACCTCGGTCA CCCGTGGCAC CACAATCGAT
CTGGGCGTCT CCCAGGAGGT TTCCAAGGTC CGCCTGATCC GTCCGGGCGC CTACACGCAC
GTGACCGACA CCGAGCAGCG CTCGGTGGCC CTCCCCCTGG TCAGCCAGGC GAACGGCAAG
GTAACGGTGA GTGTTCCCGA CAACGCCAAC CTGCTGCCGC CGGACTGGTA CATGCTCTTC
GTCGACAACG GCGAGAACAT TCCGTCCGTC GCCACCTGGG TGCAGGTCCA GTGA
|
|---|
| Protein sequence | MVQVCCLAIV IVAGNGPFLS AWATDKYDTW RSHQPDYMRQ YGRWDIVADP GSRSIHAALL
RTGKILLLAG SGNNQANFDA KRFETLLWDP TANTFEQVYT PWDVFCAGQA FLPSGELLIA
GGTKKYEVLA QDSPDGKKQE YQGLKDSYTF NPQTERYEKT GDLNFARWYP TLVTLASGQV
VAVSGLNEKG DIDPGNTEWF DQANRTWNHN EGLVKEFPTY PSLLLAGDGR LFFSGANAGY
GPASLEARQP GFWSLADGTF QAVPGLPQPE INETAGTVML PPAQEQRVMF VAGGGVGDTQ
VATARTAIVD LDDPNPHYVP GPNTTVAKRY PGVVVLPDDT VLVSGGSTAY RQKDTQTAEI
YHPDTNTFTT AADPLVGRDY HSSYLLMPDG RVAVFGSNPL SDDNFFETRI EIYSPPYMYQ
GERPVIKTAP TSVTRGTTID LGVSQEVSKV RLIRPGAYTH VTDTEQRSVA LPLVSQANGK
VTVSVPDNAN LLPPDWYMLF VDNGENIPSV ATWVQVQ
|
|---|
| |