Gene Franean1_7193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7193 
Symbol 
ID5675494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8782704 
End bp8783825 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID641246030 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001511418 
Protein GI158318910 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACGC CGATCGGGAA GCGCAACGGC TCCCTGGCGG GCGTGCACCC GGTGGAGCTG 
GGCGCCCTGG TGCTCAACGA GCTCGTCAAC CGGACCGGGA TCGATCCCGC GCTCGTCGAC
GACGTCCAGT GGGGGTGCGT GACCCAGCTC GGTGACCAGT CGAGCAACGT CGGCCGGTAC
ACCGTCCTCG CCGCCGGCTG GCCCGAGAGC GTTCCCGGGG TCACCGTGAA CCGGGCGTGC
GGATCGAGCC AGCAGGCGCT CGACCACGCC GCGTTCGCCG TCATGTCCGG CCAGCAGGAC
CTCGTCGTGG CCGGCGGTGT CGAGTCGATG AGCCGCATCC CGATGGGTGC CACCCGGCAG
ATGGGCGAGC CCTACGGGCC GAGCGCCAAG GCACGCTACG ACGGCACCGA CTTCAACCAG
ATCGTCGGCG CCGAGCGGAT CGCGCGGCGG TGGGGCTTCT CCCGCCAGCA GCTGGACGAG
TTCTCCTCGC TGAGCCACGA GCGCGCGGCC GCGGCGATCG ACGCCGGCGC CTTCGAGCAG
CAGATCGTCG CCGTCCCGAC CGAGTCCGGC CCGTTCACCG TCGACGAGGG CCTGCGGCGC
GGCACGACGC CGGAGAAGCT CGCCGGGCTC AAGCCCGTCA CCGGCGAGGA CGGCCTGCTG
CATGCCGGAA GCTCCTCCCA GATCTCCGAC GGCGCCGCCG CGCTGCTCGT GACCACCCCC
GAGAAGGCGC GCGAGCTGGG CCTGCGACCG ATCGTGCGCT ACCGCAGCGG CGCGGTCGTC
GGCTCCGACC CGTTGCTCGT CCTGAGCGGG CCGATCCCGG CGACGGAGAA GGTGCTCGCC
CGGGCCGGGC TCTCCATCGG CGACATCGGC GCGTTCGAGG TCAACGAGGC CTTCGCCTCC
GTCCCGCTGG CCTGGCTGGC GGACACCGGC GCCGACCCGA AGGTCCTCAA CCCGCTGGGC
GGCGCCATCG CGGTCGGGCA TCCCCTGGGT GCCTCGGGCG CGATCCTGAT GACCCGCCTC
GCCCACCACA TGCGCGACAA CGGCATCCGG TACGGGCTGC AGACCATGTG CGAAGGCGGT
GGCACCGCCA ACGCCGCGAT CGTGGAACTC GTCGCTGACT GA
 
Protein sequence
MRTPIGKRNG SLAGVHPVEL GALVLNELVN RTGIDPALVD DVQWGCVTQL GDQSSNVGRY 
TVLAAGWPES VPGVTVNRAC GSSQQALDHA AFAVMSGQQD LVVAGGVESM SRIPMGATRQ
MGEPYGPSAK ARYDGTDFNQ IVGAERIARR WGFSRQQLDE FSSLSHERAA AAIDAGAFEQ
QIVAVPTESG PFTVDEGLRR GTTPEKLAGL KPVTGEDGLL HAGSSSQISD GAAALLVTTP
EKARELGLRP IVRYRSGAVV GSDPLLVLSG PIPATEKVLA RAGLSIGDIG AFEVNEAFAS
VPLAWLADTG ADPKVLNPLG GAIAVGHPLG ASGAILMTRL AHHMRDNGIR YGLQTMCEGG
GTANAAIVEL VAD