Gene Franean1_7188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7188 
Symbol 
ID5675489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8778802 
End bp8779245 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID641246025 
Producthypothetical protein 
Protein accessionYP_001511413 
Protein GI158318905 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.168742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACT TCGAGGTGAG CTTCGAGGTG AGCAAAGACG TCGAGGCCAT CAAGCGGTTG 
AAGGCCCGTT ACTTCCGGCT GCTCGACACG AAGGACTGGG ACGGCCTGCG CGGGCTCTTC
ACCGACGACC TGGTGGTCGA CACCACCGGG TCGGGCGGCG GGGTGATCGT CGGTGTCGAC
GCGTTCGTCG GTTTCGTCAG CTCTCATCTT TCCGACGCGG TCACCGTCCA CCACGGTCAC
ACCCCGGAGA TCACACTGAC CTCGCCGTCG GAAGCCACCG GCATCTGGGC CATGGAGGAC
CGGATCTGGT TCGCGAACGG CCACGCGATG ACCGGTTTCG GTCACTACCA CGAGACCTAC
GCGAAGATTG ACGGCTCCTG GCGGATCGCC TCCTCGACGC TGACCCGCCT CCGCGTCGAC
ATGACCGGAC CTGCCACCGC CTGA
 
Protein sequence
MDDFEVSFEV SKDVEAIKRL KARYFRLLDT KDWDGLRGLF TDDLVVDTTG SGGGVIVGVD 
AFVGFVSSHL SDAVTVHHGH TPEITLTSPS EATGIWAMED RIWFANGHAM TGFGHYHETY
AKIDGSWRIA SSTLTRLRVD MTGPATA