| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7168 |
|---|
| Symbol | |
|---|
| ID | 5675469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8750432 |
|---|
| End bp | 8750881 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641246005 |
|---|
| Product | berberine/berberine domain-containing protein |
|---|
| Protein accession | YP_001511393 |
|---|
| Protein GI | 158318885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.094418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.11051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGC CCGGCCCCGT CCCCGCGCAC GGCGACGGGA TGCTGCTCGG CGAGCTGCCC
GAACAGGCCG TCGACGTGTT CGTGGACGTC TCCCGCACGC ACGGGCCGGC CCTGCTGTCG
CTCGAGCTGC GCCACCTCGG CGGCGCGCTG CGCCCCGGCG CGATGGCGGG CGGGGCCGTC
GACGGGATCG ACGCGGCGTT CGCGGTGTTC GCCGCCGGCA TGACCCCGAC CGAGGAGGCG
ACCCGCGCGG TGACGGCCGC GGTCGACGTC GTCCAGTGTT CGCTCGCACC ATGGTCGACG
GGCGGGTGCT ACCTGAACTT CGCCGAGCGT CCCAAGTCGG GGCAGGCGCT GTTCGGCGTG
GACGTCCATC GTCGGCTGAC CCGGATCAAG GCAGCCTACG ACCCCGCCGA CGTGATCCGG
GCCAACCACC CGGTGCCACC CGCGAGCTGA
|
|---|
| Protein sequence | MDPPGPVPAH GDGMLLGELP EQAVDVFVDV SRTHGPALLS LELRHLGGAL RPGAMAGGAV
DGIDAAFAVF AAGMTPTEEA TRAVTAAVDV VQCSLAPWST GGCYLNFAER PKSGQALFGV
DVHRRLTRIK AAYDPADVIR ANHPVPPAS
|
|---|
| |