Gene Franean1_7164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7164 
Symbol 
ID5675465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8745314 
End bp8746303 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content74% 
IMG OID641246001 
Producthypothetical protein 
Protein accessionYP_001511389 
Protein GI158318881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0828277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.128427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC TCCGCGGCGC CCGCCTGGTG GCCGCCGGCG TACCCCTGGT TCTCACGGCC 
GCGGCCTGTG CCGGAGCCGC CGCCGACGTG CGGGACAGCG TCGTCGGCGG CAGCGCTGCC
GCCGGTGACA GCCCCGGCAC CGGTGCCCGC GCCGACACCG CCGCGCTGCG AGTGGACTGG
GTCGGTGGTT TCGTGACACC GGAGATGCTG GCCACCCGGC TGCCGATAGT GGCCGTCTAC
CCCGACGGCC GGGTGATGAG CGAGGTCCCG CGGGCCGCCG TTCATCCGGG GCCAGCGCTG
TCCTACATCC AGCTGCGGCG GATCTCGGCC GCCGACGTGC GGAAGCTCGT CGACCGCGCG
GCCGCGGCCG GCGTCGGCGC CGAACAGGAC TTCGGCCAGC CACCGGTCGC GGATGCACCG
TCGACCCGAT TCACCCTCCG AACCGCGGCC GGCGTCGAGA CGATGCAGGT GGAAGCGCTG
TTCGAGGCGG ACGGCCACGG GCTGACAGCG CAGCAGCAGT CCGCGCGGCG GGCAGCCCAG
GAGCTGTTCA CAGCACTCAC CGACCTGCCC GCCACGCTGG GCCCAGGTGC GGTCAGCGAG
CCCGAGCCGT ACATTCCGGC TGCGGTGGCC GCGATCGCCT CCCCCTGGGT CGGAGACTGT
TCCTCGCCCT CCGACGCGGC CGTTCCGTCC GGCAGCGACC TTCCGTCCGG CGGCACCGCT
CCGTCCGGCA CCGACGTTCC GTGCGGCGGC GGTACCGCGG GTACGGAGCG CGTGTGGCCC
GGGCCGGCGC TGCCGGGCGA GCCGGTCGGC GGAGGTGTCG ATCTGAGCTG CGTGACAGCC
AGCGGTGAGG ACGCCACGAA ACTGCTGGCG GCAGCGCGTA CGGCTGTGAC CACCACGCGG
TGGGCGTCCG ACGGCAGGCA GTGGAGGGTC AGCTTCCGCC CGCTGCTGCC AGGCGAGTCC
GGATGCGCGG ACCTGCGTGC GACCGATTGA
 
Protein sequence
MMMLRGARLV AAGVPLVLTA AACAGAAADV RDSVVGGSAA AGDSPGTGAR ADTAALRVDW 
VGGFVTPEML ATRLPIVAVY PDGRVMSEVP RAAVHPGPAL SYIQLRRISA ADVRKLVDRA
AAAGVGAEQD FGQPPVADAP STRFTLRTAA GVETMQVEAL FEADGHGLTA QQQSARRAAQ
ELFTALTDLP ATLGPGAVSE PEPYIPAAVA AIASPWVGDC SSPSDAAVPS GSDLPSGGTA
PSGTDVPCGG GTAGTERVWP GPALPGEPVG GGVDLSCVTA SGEDATKLLA AARTAVTTTR
WASDGRQWRV SFRPLLPGES GCADLRATD