| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7148 |
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| Symbol | |
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| ID | 5675451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8729171 |
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| End bp | 8730766 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641245987 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001511375 |
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| Protein GI | 158318867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0874465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCA TGCCCATGGA AGGGTGGAAG ATGAATCGTG GGACGCGATT ATTCGTCACC
GCTGCCGCAT GCTGTGCGGC GCTCCTCCTG GGGGCCTGCG GCGGCGGCGG CAGCGATCCC
GCCACGTCCG CGGGGCCCTC GGGCGAGCCG GTGGCGGGTG GCGAAGGACG GGTTCTCACG
CTGAGTGATC CGCGTACTCT GGATCCGGCG ATCCTCGGCA ACGCGTATGC GTCCGGCGCC
TTCCTGGGCA ACGCCCTGTA CGGGACCCTG ATGACCAACG ATGAGGCAGA CGAGGTCCAT
TACTCGATGG CCGAGTCGTT CACCACGACC GACAACGGCA AGACCTTCAC CCTGAAGCTG
CGGCCGGGCC TGGTGTTCTC CGACGGCACT CCGCTGAACA CCGAGGCCGT GAAGTTCAAC
TGGGACCGGA CCAAGGACCC GGCCGTCGGC TCGGCCCACC GGTCGGAGGC GGCGACGATC
GAGTCGTCCG AGGTGGTGGA CGACGTCACG CTGAAGGTTA CCCTGGTCAC CCCCGTGCCG
AGGTACGCCC TGTCCGTCCT CGCCTCCTCG ATGAACTGGA TCGCCTCACC CGCGGCCCTG
CAGAAGGGCC AGCAGGCTTT CGACGCGAAG CCGATCGGCG CGGGACCGTT CACCCTGGAG
AGCTGGACCC GTCAGGCCGA CATCCGGCTC GTCAAGAACC CCCGCTACTG GGACGCGCCC
AAGCCCTACC TCGACCGCCT CACCCTCCGC GCGGCGCTCG AAGGCAACCA GCGCTACAAC
ACGCTGCTCA CCGGGGGCGC GGACGTGGCC ATCGACTCGA GCTGGATCAA CCTCGACAAG
GCCACCAAGG CGGGTCTGCC GAAAAATGTC ATGCGGCTCA GCGGCGGCGT CTTCGCAGCG
CTGAACATGC GCAGAGCACC GTTCGACGAC ATTCGTGCGC GTCGGGCGCT CGCGGCGGCA
CTGGACTCGG ACGCGCTGAA CCTCGCAGCG TACAACGGCA CCGCGCAGCT GGCCGATACG
TTGTTCACCG ACGCCTCCCC CTTCTACTCG GAGACGCCGC TGCGCAAGAC GGACAAGGCG
ACCGCCCAGC GGCTCTTCGA CGAGCTGGCC GCCGAAGGCA AGCCACTGAC CTTCACGTTC
ACCAGCTCCA CCGCCAGCGA GAACAAGGCG CTTGCGGAGA ACATCCAGGC CCAGCTCAGC
GCCTTCAGGA ACGTCAAGGT CCAAATTAAG ACCATTGAGC TCGCCGAGTT CGTCCAGCTG
CGCAGGACGC TCGACTTCGA CGCGGTTATC ACGTCCGCGC TCTTCCAGGA CCCCGAGCCT
CGGTTGTCGA CGGTTTTCGC CGGGGGCTCG CCGGCGAACC TGGCCGGTAT CAACGACCCG
GCGCTCAACG CGGCCCTGCA GACCGGCCGG ACCGCGACCT CGGAGGAGGA GCGCAAGGCG
GCCTACGACA CCGTGCAGGA ACGGCTGACC GAACTGACCC CGATGTTCTT CATCGCGCGT
GGGGGGCTCG GCGCCATCTC GGGCAAGAAC GTCGGCGGCC TCGTGCAGTA CGGCCTTGGT
TCCCTGCTTC CCGAGGAACT GTGGATCCAG CCGTAA
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| Protein sequence | MTLMPMEGWK MNRGTRLFVT AAACCAALLL GACGGGGSDP ATSAGPSGEP VAGGEGRVLT
LSDPRTLDPA ILGNAYASGA FLGNALYGTL MTNDEADEVH YSMAESFTTT DNGKTFTLKL
RPGLVFSDGT PLNTEAVKFN WDRTKDPAVG SAHRSEAATI ESSEVVDDVT LKVTLVTPVP
RYALSVLASS MNWIASPAAL QKGQQAFDAK PIGAGPFTLE SWTRQADIRL VKNPRYWDAP
KPYLDRLTLR AALEGNQRYN TLLTGGADVA IDSSWINLDK ATKAGLPKNV MRLSGGVFAA
LNMRRAPFDD IRARRALAAA LDSDALNLAA YNGTAQLADT LFTDASPFYS ETPLRKTDKA
TAQRLFDELA AEGKPLTFTF TSSTASENKA LAENIQAQLS AFRNVKVQIK TIELAEFVQL
RRTLDFDAVI TSALFQDPEP RLSTVFAGGS PANLAGINDP ALNAALQTGR TATSEEERKA
AYDTVQERLT ELTPMFFIAR GGLGAISGKN VGGLVQYGLG SLLPEELWIQ P
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