| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7144 |
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| Symbol | |
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| ID | 5675447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8724418 |
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| End bp | 8726166 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641245983 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001511371 |
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| Protein GI | 158318863 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.310406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG TCGAGCTCGC GGAGATCGTC GACAACCTTC GCACCATCGG TACAGACATC
GCCGACGTGG AGGTGAAGAA GGCCCACGGT GGGCTGCCGA AGTCGCTGCG CGAGACTCTC
TCCGGGTTCT CGAACACGCG AGGCGGTGTG GTCGTCCTTG GTCTGGACGA GACCCAGGGC
TTCGCGCCGA CGGGACTTCC CGATCCGGCG AGGCTCGCGG CTGATCTTGG TTCCATGTGC
TCCGAGGACA TGGAACCGCC GCTCCGACCG TTGATCAAGG TCCACGACTT CGAGGGCGCC
CAGATCCTGG TCGCCGAGGT CCCCGAGCTC GATCCCGCGC GGAAGCCCTG CTACTCGCGT
GGGGCCGGCA TCACCAAGGG TAGCTACGTC AGGGTCGGCG ACGGTGATCG TCGGCTGTCG
GCCTACGAGG TCCAGATGAT GCTCTCCTCA CGTGGTCAGC CTCGTGAGGA CGAGCAAATA
GTCTCTGGCG TTGGTCTCGA TCATCTGGAT GCGGCCATGG TCGATGCGTT GGTCGCCCGG
CTGAGGACCA GCAGGCCCTA CGCGTTCAAG GACTTGGACC GCTTGGCTGT GCTGCGTCGC
GCCAAGGTGC TCGTGACTGG AGACAGCGGC GAGGACGTGG CGTCGCTGGG AGGCCTGCTC
GCCCTGGGCA GGTATCCGCA GGAGCACTTC CCGCAGCTGA TGGTCACCTT CGTCCACTAC
CCGACCGAGA CCGGCGGCCG GTCCACCGAG AGGTTCCTGG ACAACGTGAC GTTGGAAGGC
CCGGTCCCGG TCATGGTCCG CGACACGCTG GCCACCGTCC GCCGGAACAT GTCTCGTCGG
GCTGTCGTCG GGGGTGCGGG TCGGCAGGAC GTCTGGGAGT ACCCAGAGAC CGCTCTGCGT
GAAGCCGTCG TCAACGCACT GGTCCACCGC GACCTGTCCG GGGGCGCTCG AGGCGCCCAA
GTCCAGGTCG AGATGTACCC CGACCGCCTG GTGATCCGTA ATCCGGGCGG TCTGTTCGGT
CCTGTCACGG TCGACAGTCT CGGCGAAGAA GGTGTCTCCT CAGCCCGCAA CGCCACCCTC
ATCAAGATCC TCGAAGATGT CCCGCTGCCC GGCGAGACCC GCACCGTCTG CGAAAACCGC
GGGTCGGGCA TCCGCGCCAT GCTCGACTCG CTGCTCGCCG CGGGAATGAG CCCACCGGAC
TTCAACGACA AGATCTCGTC GTTTGTCGTC GTCTTCCCCA ACCACACCCT GCTCGGCGAG
GAGACCGTCG CTTGGATCAC CGGGTTGGGT GAGAAGGGCC TGACCGACAG CCAATGCGTC
GCCCTCGCGC TCCTACGCCA GGAAGAAATC CTTGACAATC GCGCCTATCG CAACGCGACT
GGCGTCGACT CCCGTGTAGC CACCAGCGAG CTTCGGGACC TGGTCGCTCG CGAACTCGTC
ACCCAGACCG GAACCCGCCG CTGGGCCAGG TACCAGCTGT CCTGGCGAAC AACCTCAACG
AAAGGCCAGT CCTCTCGGGC CGACCGCCGA CCGGAGCTGC TCGTCGCCCT CGGAAACGAG
ACTCTCTCAC GCTCCGAACT CGTTACACGG ACCGGTCTCA GCGACCAGAC CATCCGACGA
TGGCTGAAGA TCATGCGGGA CGAAGGCTCG GTCGACATCG TCGGTAGCAG CCTCAAGAGC
AGACACGTTC GATACCGCCG CACCTACCAG GATCTGCTCT TCCACTCCGA AGGCACAGAC
CGCGACTGA
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| Protein sequence | MLDVELAEIV DNLRTIGTDI ADVEVKKAHG GLPKSLRETL SGFSNTRGGV VVLGLDETQG
FAPTGLPDPA RLAADLGSMC SEDMEPPLRP LIKVHDFEGA QILVAEVPEL DPARKPCYSR
GAGITKGSYV RVGDGDRRLS AYEVQMMLSS RGQPREDEQI VSGVGLDHLD AAMVDALVAR
LRTSRPYAFK DLDRLAVLRR AKVLVTGDSG EDVASLGGLL ALGRYPQEHF PQLMVTFVHY
PTETGGRSTE RFLDNVTLEG PVPVMVRDTL ATVRRNMSRR AVVGGAGRQD VWEYPETALR
EAVVNALVHR DLSGGARGAQ VQVEMYPDRL VIRNPGGLFG PVTVDSLGEE GVSSARNATL
IKILEDVPLP GETRTVCENR GSGIRAMLDS LLAAGMSPPD FNDKISSFVV VFPNHTLLGE
ETVAWITGLG EKGLTDSQCV ALALLRQEEI LDNRAYRNAT GVDSRVATSE LRDLVARELV
TQTGTRRWAR YQLSWRTTST KGQSSRADRR PELLVALGNE TLSRSELVTR TGLSDQTIRR
WLKIMRDEGS VDIVGSSLKS RHVRYRRTYQ DLLFHSEGTD RD
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