| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7137 |
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| Symbol | vanB |
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| ID | 5675440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8717659 |
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| End bp | 8718705 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641245976 |
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| Product | D-alanine--D-lactate ligase |
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| Protein accession | YP_001511364 |
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| Protein GI | 158318856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.137191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAC TGAGGATCGG AATCATATTC GGGGGCCGTT CCGAGGAGCA TCCCGTCTCC
GTCCGGTCTG CACAGGAGAT CGCAAAGAAC ATCGATGCCG AGAAGTACGA ACCGTTCTAC
ATCGGGATCG CGAGGAGCGG TGCCTGGAAG CTGTGCGAAC GCCCTGACGA AAATTGGGAG
AACGGCAGCT GCCGTCCGGC TGTGCTGTCA CCGGACAGAA GCGTCCACGG GTTGCTGGTT
CTGGAGCAGG GAAGATACGA AACGATCAGC CTGGACCTGG CGTTGCCCGT TCTGCACGGC
AGACTCGGCG AGGACGGTGC GATGCAGGGT CTGCTGGAGC TCTCCGGCAT CCCCTACGTG
GGCTGCGATG TCCAGAGTTC CGCTTTGTGC ATGGACAAGT CCCTTGCCTA CACCGTCGCC
AGAGGCGCGG GAATTGCTAC GCCGAATTTC TGGACCGTGA CGGCGAACGA GAAAGTGGAT
GCCGACCTGC TCACCTATCC CGTATTCGTG AAGCCGGCCC GTTCGGGGTC ATCCTTCGGC
GTCAGCAAGG TGTCTCGAAA AGAAGAGCTG TCGGGTGCAG TGGATACCGC ACGACAGTAC
GACTCGAAGG TGCTGATCGA AGAGGCTGTC GTCGGCAGCG AGGTCGGATG TGCCCTGCTG
GGGAACGATC TGGATCTGAC CGCGGGCGAG GTAGATCGAA TCTCGCTGTC TCATGGATTT
TTCAGGATAC ATCAGGAGAG TGCGCCTGAA AGCGGTTCCG AGAACTCGAC GGCAATCGTT
CCAGCGGACA TCTCGGCAGA GGCGCGCTCG CTCGTTCAGG AGACGGCAAA GGCCGTCTAT
CGCGCCCTGG GATGCAGGGG CCTGTCGCGG GTGGACATGT TCCTGCAGGA AGACGGGAAA
GTAGTCCTCA ACGAGGTAAA CACCCTGCCC GGCATGACAT CGTACAGCCG TTATCCGAGA
ATGATGGCGG CCGCGGGGCT GCCGCTCGCC GAGGTGATCG ACCGGCTGGT GTCGCTGACA
TTGGCGGGAA AAGTCGATGA AGGATGA
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| Protein sequence | MDRLRIGIIF GGRSEEHPVS VRSAQEIAKN IDAEKYEPFY IGIARSGAWK LCERPDENWE
NGSCRPAVLS PDRSVHGLLV LEQGRYETIS LDLALPVLHG RLGEDGAMQG LLELSGIPYV
GCDVQSSALC MDKSLAYTVA RGAGIATPNF WTVTANEKVD ADLLTYPVFV KPARSGSSFG
VSKVSRKEEL SGAVDTARQY DSKVLIEEAV VGSEVGCALL GNDLDLTAGE VDRISLSHGF
FRIHQESAPE SGSENSTAIV PADISAEARS LVQETAKAVY RALGCRGLSR VDMFLQEDGK
VVLNEVNTLP GMTSYSRYPR MMAAAGLPLA EVIDRLVSLT LAGKVDEG
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