| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7134 |
|---|
| Symbol | |
|---|
| ID | 5675437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8714670 |
|---|
| End bp | 8715791 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641245973 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001511361 |
|---|
| Protein GI | 158318853 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.274671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAGGG CGCCCGGTTT GAGCGTTCGC CTCAAACTCA CCCTCAGCTA CGCCGGCTTC
CTCATGCTTG CGGGTGTCTT GCTGCTCGCG GTCGTGTGGG TGTTCCTGCT GCGTTACGTA
CCCGAGACGA TCTACACAGC ACCTCCCGAA ACGGGATCGC GACCCGGCCC CTTTATGTTC
ATACCCGACC GCTCCGACCT GCTTCAAGCC TTCGTCCCGA AGGCAGCCGC AATGCTGGCG
TTCCTGCTGA TGTTCAGCCT GCTGGGAGGA TGGATCCTCG CCGGCAGCAT GCTCGCGCCC
CTGACCCGCA TCACCAACGC GACCCGCCTG ACCGCGAACG GATCGCTCTC CCACCGGATC
CAGCTGGAAG GCCGCAAGGA TGAATTCCGC GAACTCGCCG ACGCCTTCGA CGCCATGCTC
GCGCGGCTCG AAGCACACGA CGCCGAACAG CAGAGGTTCG CAGCCAATGC CTCCCACGAA
CTGCGCACCC CGCTGGCGAT CACGCAGACC CTGCTCGACG TGGCCCGCAA AGATCTGAAC
CGCGACGCCG GCGAACTTGT CGACCGCCTC CATTTGGTCA ACACCCGAGC GATCGACCTC
ACCGAAGCAC TGCTTCTGCT CAGCCGTGCC AACCAGCGAT CCTTCACGCG AGAACGCGTC
GATCTGTCCC TGGCGGCGGA AGAAGCGACT GAAACGCTTC TCCCCCTCGC AGAAAAACAT
GGCGTCACCA TCGAGACCTC CGGCGACATG GCCGCCACCA TCGGCTCACA TGCGCTCCTG
CTGCAGATGA CCACGAACCT TGCGCACAAC GCGATCGTCC ACAATCTGCC TGAACAGGGC
ACCGTGTGGG TCACGACGAG CGTTCACTCG ATGACGGTTG TGCTCACTGT CGAGAACACC
GGCCAGAAGC TCGCCCCACA AGTGGCTTCC ACGCTTGTCG AGCCGTTTCA ACGCGGCACT
GGACGCACTC GCACCGACCA CGCAGGTGCC GGCCTCGGCC TGGCAATCGT CAAGAGCATC
GCCCAGGCAC ACGACGGAAC CATCACCCTC ACCCCCCGGG ATGCTGGGGG GCTCTGCGTC
ACGGTGCGAC TACCCGTCGC GCCACTGCGC GCTGGCAGAT AA
|
|---|
| Protein sequence | MDRAPGLSVR LKLTLSYAGF LMLAGVLLLA VVWVFLLRYV PETIYTAPPE TGSRPGPFMF
IPDRSDLLQA FVPKAAAMLA FLLMFSLLGG WILAGSMLAP LTRITNATRL TANGSLSHRI
QLEGRKDEFR ELADAFDAML ARLEAHDAEQ QRFAANASHE LRTPLAITQT LLDVARKDLN
RDAGELVDRL HLVNTRAIDL TEALLLLSRA NQRSFTRERV DLSLAAEEAT ETLLPLAEKH
GVTIETSGDM AATIGSHALL LQMTTNLAHN AIVHNLPEQG TVWVTTSVHS MTVVLTVENT
GQKLAPQVAS TLVEPFQRGT GRTRTDHAGA GLGLAIVKSI AQAHDGTITL TPRDAGGLCV
TVRLPVAPLR AGR
|
|---|
| |