Gene Franean1_7122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7122 
Symbol 
ID5675425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8691466 
End bp8692698 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content71% 
IMG OID641245958 
Producttransposase IS111A/IS1328/IS1533 
Protein accessionYP_001511349 
Protein GI158318841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTCG TCGGAGACGA CTGGGCCGAA GACCATCACG ACATCGAGAT CCAGAACGAG 
GCGGGACAGC GTCTCGCTCG CGCTCGGCTT CCCGAGGGCG TCGCCGGCCT CGCCCGGTTC
CACGCACTGA TCGCCGACCA CCTCGGCGGC GACGAGGATC CGTCACAGGT CGTGGTGGGA
ATCGAAACCG ACCGGGGACC ATGGGTCGGC GCCCTGGTCG CGACCGGCTA CCAGGTCTAC
GCAATCAACC CGCTCTCCGC CGCCCGGTAC CGCGAACGGC ACGTCACCTC CCGGGCGAAA
AGCGACCCTG GAGACGCGAG AGTACTGGCG GACCTGGTCC GCACCGACCG GCATCACCAC
CGCACCGTCG CCGCGGACAG CGACCTCGCC GAAGCCGTGA AAGTCCTGGC CCGTACCCAT
CAGAACCTGG CCTGGGCACG GCAACGACAC GCGAATCTGC TGCGTTCGAC GCTGCGGGAG
TTCCACCCGG CCGCCCTGGT CGCCTTTGAC GACCTCGCGA GCCGTGACGC CCTCGCCGTC
CTGGCCGCCG CCCCGACCCC GGCAGCCGGC CGCGCGCTGA CCACGACACG GATCGCCGCC
CTGCTCCGCA GGGCCGGCCG GCAACGCCGC GCCGACACCC GAGCAGAGGA GATCCGCAGC
GCGCTGCGCG GAGAGCAGCT CACCGCACCC ACCGAGATCG CGCAGGCATT CGGGCACACC
GTCATCGCCG TCGTCGCGGT CCTGACGACC CTCGTCGCGC AGATCGACCG GGTCGAGGCC
GAGATGACCA CACGCCTCCA CCAGCATCCC CACGCCCGGA TCTACCTGTC CCTGCCCGGA
TTCGGGCCGG TCCTGGCCGC ACGGGCCCTC GGCGAGTTCG GCGACGACCC GAACCGATAC
GAGACCGCTC GTGCCCGCCG CAACTACGCC GGCACCTCAC CGATCACCCG CGCCTCCGGC
AAACGCCGTG TCGTCTTGGC CCGCGTCGCG GTTAACAGCC GCCTCCGCGA CGCACTGGCA
ACCCAGGCAT TCGCCGCGCT GAAAGCCTCA CCCGGCGCGC GGGCCTACTA CGACAGCCAT
CGCGCCCGCG GCATGACCCA CCACCAGGCG CTACGCGCCC TCGCGAACCG ACACGTCGCC
ATCCTCCACG GCTGCCTACG CCACCAGACG GCCTACGACG AAGCCACCGC CTGGCCAGCC
CTCACCGACA CCACCCAGAC CGCCGCCGCT TGA
 
Protein sequence
MLFVGDDWAE DHHDIEIQNE AGQRLARARL PEGVAGLARF HALIADHLGG DEDPSQVVVG 
IETDRGPWVG ALVATGYQVY AINPLSAARY RERHVTSRAK SDPGDARVLA DLVRTDRHHH
RTVAADSDLA EAVKVLARTH QNLAWARQRH ANLLRSTLRE FHPAALVAFD DLASRDALAV
LAAAPTPAAG RALTTTRIAA LLRRAGRQRR ADTRAEEIRS ALRGEQLTAP TEIAQAFGHT
VIAVVAVLTT LVAQIDRVEA EMTTRLHQHP HARIYLSLPG FGPVLAARAL GEFGDDPNRY
ETARARRNYA GTSPITRASG KRRVVLARVA VNSRLRDALA TQAFAALKAS PGARAYYDSH
RARGMTHHQA LRALANRHVA ILHGCLRHQT AYDEATAWPA LTDTTQTAAA