Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7116 |
Symbol | |
ID | 5675420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8686609 |
End bp | 8687775 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245953 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001511344 |
Protein GI | 158318836 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTCC GTCCGCCAGT GGCCGATCGG CTGCTGGCGG CGGCCTCGTT CGTGCTCGGC GTCGTCGTCG CGATCACGCT CGAGGCGGTC GATTTCGACG GCGAGCGAAG CGTAGATCTG TGGGCGATCG CGCTCCTGGG CGCGATGTCG GCGGCGTTAC TGGCCCGCCG GCGCTGGCCG ATCCTCGTCG TCCTCGCGGT CCTCGCAGTG TCGACGCCGT ACCACGTCCT CGACTATCCC CATGAGGCCA CGATGCCGGC CTCGCTTGTG GCGGCGTTCA CGGCGGCGCG CTGCAGCGAG CCACCGCGGC GGGCCCTCGC CGCCTTGGTG GCGGTGGCCG CGGTGACCGT GCCGGTCCTC GCCGACGAGG CGTCGGGGGC ACCTGACGAT GCTCTCCTCG GCGTCGGCTG GCTGTTCATG GCCTTCTTTG CCGGGCTGGC GGTCCGCTTC CATCAAAACT GGAAGGCCGC CGTCACCGCG CGGCTTGAGC AGGAGCGTGC CGACGAGGTC GAGCGGCGGG TCGCCGAGGA GCGGGTCCTG ATCGCTGCCG AGCTGCACGA CGTCCTAGCG CACGGCCTCG CGGTCGCGAA CGTCCAGGCT TCCGTCGCTG CGCACCTGAT CGACCAGCTG CCGAGGCGCG GGGATGCGTC GCTGCAGGAG CTGTCCAGAA CGCTGCATAA CCTGTCGGAC ACGAGCCGGG CCACACTCCA TGAGCTGCGT GCCGTTCTGG ACGTGCTGCA TGGTGGCGAG GCCGAGCCAA CCGAGCCAGT GCCCCACCTC GGCGAGCTGC AGCGTCTGGT GGAGATGGCC GAGGCGGCTG ATATCCGAGT CGACGTGGAG GCTGACGGGC TCCCGGACGA GTTACCGTCG ACGGTGTCCG TCGTGGCCTA TCGGATCATC CAGGAGTCGC TCACCAATGT CATTCGACAC TCGACGGCCA AGCACGCGAC CGTCCGGCTC GGCCAGAACG GCCACCGGCT GCGGATCGCG GTCGTCGATC ACGGGCCCGC GCGACCGAGC TCAACCGTGA CACCCGGCTT CGGGATCGCC GGGATGACAG GGCGAGCACA GGCCGTCGGT GGCGAATTGT CCGCCGGCCC GGGCGAGTCC GGAGGATTCG AGGTATGGGC CAGCCTGCCG CTGCCGGAGA TCTGGCGGGT GCCGTAG
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Protein sequence | MALRPPVADR LLAAASFVLG VVVAITLEAV DFDGERSVDL WAIALLGAMS AALLARRRWP ILVVLAVLAV STPYHVLDYP HEATMPASLV AAFTAARCSE PPRRALAALV AVAAVTVPVL ADEASGAPDD ALLGVGWLFM AFFAGLAVRF HQNWKAAVTA RLEQERADEV ERRVAEERVL IAAELHDVLA HGLAVANVQA SVAAHLIDQL PRRGDASLQE LSRTLHNLSD TSRATLHELR AVLDVLHGGE AEPTEPVPHL GELQRLVEMA EAADIRVDVE ADGLPDELPS TVSVVAYRII QESLTNVIRH STAKHATVRL GQNGHRLRIA VVDHGPARPS STVTPGFGIA GMTGRAQAVG GELSAGPGES GGFEVWASLP LPEIWRVP
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