Gene Franean1_7086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7086 
Symbol 
ID5675396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8652873 
End bp8655071 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content69% 
IMG OID641245931 
Productserine/threonine protein kinase 
Protein accessionYP_001511322 
Protein GI158318814 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGT CGGAGCACCG GGCCGGGCAC GTGAACCTCG ACCGCGCACA CCTGGAAGCG 
GCCCTCCCCG GGTACGCGGT CACCCGCCTC ATCGCCAGCG GCGGGTTCGG ACTCGTCTTC
GCCGGCCGGC ACCTAAGCCT CAACCGGCCG GTCGCCATCA AAATCCTGCT TCCGGATTCG
GACGCCGGCG CGGGCGCCGG TACGGCCCGG GCGGCCTTTG CCGCCGAGGC CCGGCTGCTG
GAACGCCTCA CCCATCCCCA CATCGTCCGC GTGCACGACT ACGTCGAACG AAACGACTTG
TGCATGATTG TGATGGAGTA CTGCGACGGT GGAACGCTGC GACGGCGGGC ACGGGAAGGA
CTGACAGCCG TGGCCGCGGC TGGTGTCGGG CTCGCCATCG CCGCCGCGCT CGACCTGGCC
CACCAGGAGC AGGTGATCCA TCGTGACATC AAACCGGAGA ACATCCTGTT CGCCGGTGAC
GGAACCCCGA AGGTCTCCGA TTTCGGTATC GCCAAGATCG TAGAGTCGAC CGGTAACCCC
ACGAACACCG TGATCGGCAC GCCCGTCTAC ATGGCTCCGG AACAGTTCAC CGGAGAGCCG
CTACGGCCCG CCACCGACCT GTATTCCTTG GCCACCGTCC TCTACGAGCT GCTGTCGGGG
CGGACACCGT TCGCCCGCCA AGGCGCCGCG ATCTACCTCG CCAGCCAACA TCTACACGAA
CCACCACCGC CGTTGGGCGC CCCCACGCCC CCCGAAATCG CCGCGGTCGT CATGCGGGCG
CTGCACAAGG ACCCGCACAA GAGACATCCC ACCGCCGCGG CGTTCGCCGC CGATCTCGTC
ATCGCCGCAG CCGGCGCCTT CGGTCCAGGG TGGTTGGACG GCTGCACCGT GCCCCTCCAC
CTCGCCGACG AGATCCGCAC CGCAGCACAC CGCGGCAGCC CGCGGCCCGT CACCACGCCT
CCTGCCAGGC AGACCCGGTC CCCTGACCCG CTCGGGCCCT CCGGACCCGG CGATGTCTCC
GGACCTGACC GATCCCCCGC TGCAAGAAAT CCCCCTGCAC TGGAAGAGTC AGACAGACAG
AAAGACGATG CCCTCACGAC GACAAGTGGA CCAGCTGCCG TCAGCGTGCT TCCTCCGTCG
GCTCCGGTTC CCCCTGCTCC CGGGACAGGT CCGGCGGCCC GCCAACGCGG GACCTCCACC
GGCAAGGCCA GGCGCGGTTG GTGGCCGGGC CGGCGCAGAT CGATAAGGGA GCCGGTCGTC
GGACCGGCGA CTCTATCCAT CGACTACCAG ATCGACAGCC CGTTCGGCGT GGCCGTGGCC
CCCGACGGCG CCCTGCTCGT CTCCCAGCCC CTCCTCCACC GGATCAGCCG GGTGGACCCG
GGTTTCCTTA TCAACCTGGC CCACACCGGC ACAGCGCCCG GTGGGCCAGC CCGGAGCACG
ACCACGTTCG CCGGCAAAGG GAAAGCTGGC CGGAGTGGTG ACGGCGGGCC TGCACCCGAT
GCCGAACTGG ACAGCCCGGC CGGTATCGCC ATGAGTTCCG ACGGATCCCT CCTCATCGCC
GACTGCCTCA ACGACCGGCT ACGCCGAGTG TCACCTGACG GCCGGATCGA GACCATGCCC
GCCCTACCCG GACTGCGTCA ACCGAGGTCA GTGACGGTGG ACCCGCACGG CGTCATCTAC
CTCGCCGACA CCGGCAACCA CCGAATCTGG CGTCTCGACC CGGGAGACGG AGCCCGAGTT
GTCGCAGGTT CGGGCACCCC CGGGTACTCC GGGGACGGCG GCCCGGCAGT CCACGCATCG
TTGACCCGCC CACAGGCTGT CGCGGTCGAT GCGCAGGGCC GGCTCCTCAT CGCCGATCAG
GAACACCGCC GAATCCGGCG AGTCGACACC ACAGGGCGCA TCACTACCAT CGCCGGCACC
GCCTACGGCG GCCGCCCGGC GTCGGCGGGA CAACCAGCAC ACACCACCGA TATCGGTGCC
CCGACCGGCC TCGCCGTCGG CCCCGACGGC GTCATCTACC TCGCTGATTC CGCCAACAAT
CGAGTGCTCG CCATCGCCGG GGACAGCACG GTAAGCGTGC TCGCCAGCCG ATCCGGACCA
GTGGTGGTGG CCGACCCGCG CCAGGTAGCA GTCGGACCGA GCGACACCGT GTACATCGCG
CAGCCAGGTC GGCACCGAAT CACCATCATC CCGGGATGA
 
Protein sequence
MALSEHRAGH VNLDRAHLEA ALPGYAVTRL IASGGFGLVF AGRHLSLNRP VAIKILLPDS 
DAGAGAGTAR AAFAAEARLL ERLTHPHIVR VHDYVERNDL CMIVMEYCDG GTLRRRAREG
LTAVAAAGVG LAIAAALDLA HQEQVIHRDI KPENILFAGD GTPKVSDFGI AKIVESTGNP
TNTVIGTPVY MAPEQFTGEP LRPATDLYSL ATVLYELLSG RTPFARQGAA IYLASQHLHE
PPPPLGAPTP PEIAAVVMRA LHKDPHKRHP TAAAFAADLV IAAAGAFGPG WLDGCTVPLH
LADEIRTAAH RGSPRPVTTP PARQTRSPDP LGPSGPGDVS GPDRSPAARN PPALEESDRQ
KDDALTTTSG PAAVSVLPPS APVPPAPGTG PAARQRGTST GKARRGWWPG RRRSIREPVV
GPATLSIDYQ IDSPFGVAVA PDGALLVSQP LLHRISRVDP GFLINLAHTG TAPGGPARST
TTFAGKGKAG RSGDGGPAPD AELDSPAGIA MSSDGSLLIA DCLNDRLRRV SPDGRIETMP
ALPGLRQPRS VTVDPHGVIY LADTGNHRIW RLDPGDGARV VAGSGTPGYS GDGGPAVHAS
LTRPQAVAVD AQGRLLIADQ EHRRIRRVDT TGRITTIAGT AYGGRPASAG QPAHTTDIGA
PTGLAVGPDG VIYLADSANN RVLAIAGDST VSVLASRSGP VVVADPRQVA VGPSDTVYIA
QPGRHRITII PG