Gene Franean1_7072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7072 
Symbol 
ID5675382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8631576 
End bp8631884 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content65% 
IMG OID641245917 
Productphosphotransferase system lactose/cellobiose-specific IIB subunit 
Protein accessionYP_001511308 
Protein GI158318800 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCAAGGGTGA GGACATCCAC AAGCTCGTTG TCGCCTGCGA CGCGGGAATG 
GGAAGCAGCG TGATGCTGGC CAGCCAGCTC CGCAAGCAGC TCAAGGCGTA CGCGGTCACC
GTCGAGCACA CCCCGGTGAA CTCCATTCCG GCGGACGCCG ATCTGGTCGT CTGCCACGTC
GGCCTGGCTG ACCGGGCCCG CCGGGGGGTG CCGGACAAGC CGATCGTGAC ATTCCAGGTG
TTCATAGGTG ATCCGGCCGT GGCCAACGTG CTGGCCGCCA TCCGCGAGGG GAAAGTGCTC
GATGTCTGA
 
Protein sequence
MATIKGEDIH KLVVACDAGM GSSVMLASQL RKQLKAYAVT VEHTPVNSIP ADADLVVCHV 
GLADRARRGV PDKPIVTFQV FIGDPAVANV LAAIREGKVL DV