Gene Franean1_7070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7070 
Symbol 
ID5675380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8630052 
End bp8631092 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content71% 
IMG OID641245915 
Productalcohol dehydrogenase 
Protein accessionYP_001511306 
Protein GI158318798 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGG CCCGGTTCTA CGCGCCCGGG GACATCCGGA TCGAAGAAGC GTCCGAGCCC 
GTGGCGGGCC CGGACGAGGT GAAAGTCCGC GTCCGGAACT GCTCCACCTG CGGGACGGAC
GTCAAGATCT CGAAATTTGG CCACCATCAC ATCCGCCCGC CCCGGGTGAT GGGGCACGAG
GTCGCCGGCG AGATCGTGGA CGTCGGTGAC CGGGTCGAGG GCTGGCAGGT CGGTGACCGG
GTTCAGGTGA TCGCGGCGAT CCCGTGCGGG CGGTGCGACG AGTGCCGGCG CGGCCGGATG
ACGGTCTGCC CCAACCAGGA GTCCATCGGA TACCACTACG ATGGCGGCTT CGCCGAGTAC
GTGACCGTTC CCGGCAAGGT CCTCGCCGTG GACGGGCTGA ACCGGATCCC GGAGGGGGTC
GGATTCGCGG AGGCGTCGGT GGCCGAGCCG CTCGCGTGCG TCCTGAACGG GCAGGAACTC
GCCCGCGTCG GGGCGGGGGA CGACGTCGTC ATCATCGGGT CCGGGCCGAT CGGCTGCCTG
CACGTGCGGC TCGCCCGCTC GCGCGGCGCC GGCCGGGTGT TCCTCGTCGA GCTCAACCGG
GAGCGGCTGG ACCGCGCCGC CGCACTGGTG GAGCCCGACG CGAGCATCTG TGCCGCCGAA
ACCGACGCGG TCGACGCGGT CAGCAAGCTC ACCGACGGCC GGGGCGCCGA CGTCGTCATC
ACCGCCGCCG CGTCGGGAGC CGCGCAGGAA CAGGCACTGC TGATGGCGGC CAGGCAGGGC
CGGATCAGCT TCTTCGGGGG GCTGCCGAAG GACAATCCGG TCATCGCCTG CGACTCGAAC
CTGGTCCACT ACCGGGAGCT CACCATCGTC GGCGCCAACG GCTCCAGCCC TGCGCACAAC
GCGCGGGCGT TGCAACACAT CGCCACCGGC GACGTGCCGG TGTCCGATCT GATCACCCAC
CGGCTCGCCC TCACCGACGT GCTGGCGGGC ATCGACATCG TCAGCCGCGG CCAGGGCATC
AAGATCACGA TCGAGCCCTG A
 
Protein sequence
MKVARFYAPG DIRIEEASEP VAGPDEVKVR VRNCSTCGTD VKISKFGHHH IRPPRVMGHE 
VAGEIVDVGD RVEGWQVGDR VQVIAAIPCG RCDECRRGRM TVCPNQESIG YHYDGGFAEY
VTVPGKVLAV DGLNRIPEGV GFAEASVAEP LACVLNGQEL ARVGAGDDVV IIGSGPIGCL
HVRLARSRGA GRVFLVELNR ERLDRAAALV EPDASICAAE TDAVDAVSKL TDGRGADVVI
TAAASGAAQE QALLMAARQG RISFFGGLPK DNPVIACDSN LVHYRELTIV GANGSSPAHN
ARALQHIATG DVPVSDLITH RLALTDVLAG IDIVSRGQGI KITIEP