| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7063 |
|---|
| Symbol | |
|---|
| ID | 5675373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8618727 |
|---|
| End bp | 8620721 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641245908 |
|---|
| Product | restriction endonuclease |
|---|
| Protein accession | YP_001511299 |
|---|
| Protein GI | 158318791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGT CAGGTGGCGG TCAGTCGGAA TGGCAGCAGC GACGCGCCGC GGCTGCAGGT
GCTGAGCGGG AGGCTGCGCG ACAACGTAAA CGCGAAGCGA CCGCGCGAGC AAAGCAGGAC
GAGCGCGAGC GGGAGCAGGC CCAGCGCCAG CAGTCGGTGG ACGACGACAA CGCTGCCGCA
GCCGCTCACA TCGCAGAGCT GGGCAGGAAC CTGCTACTCA ACGTCTTGGG CCTCCCTGCC
TTCACCGTGG CCGCGCTGGA GGTAGTACCG GAGCAGTCGA TCTTTCAGCC GGGATCGCTG
GCAGTCGCTG GTAGGGCGCC GGATTGGGAG CAATACAAGC CTCCGGCTCC TGGTCGGGCC
AGCCGGCTGG TGGGCGGGTC GGGTCGATAC CAGCGGGAGT TCGACGCGGC CCGAAGCAAG
TGGGAAGCCG ACACGGCCGA GTTCCAGCGG GTCGAGACCG ACCGGCTACG ACAACTCGCT
GCGGCTCGTA CCAGACACGG CCAGCAGGTG GCCGCGGCCC TCGACCGTGC CGCGGCGCAC
AACGCCCGCA TCGCGGCACA GTGGGCGGCG TGTCTGGACG GTGACCCGGA AGCGGTCGAG
TGGTTCGTCG GCCAAGCGCT CGCGGCCACG TCCTATCCTG ACGGCTTCCC CGTAGCACGC
AAGGTCGCCT ACCGGCCCCA GGAACACGAC ATCGTCATCG AGATCGAGTT CCCACGACGA
TCCGTGATCC CCGAAATCAG GGGATACAAG CTATTCAAGA CCGCACCCGA GGTCAGGCCG
GTAAAGTGGA AAGAGTCTGA AGTCAAGAAG CTATATGCGC AGCTCGTTGC CTGGATAACG
TTGCGGATAG TGCACGAGGT TTTCGAGGCT ACGAAGGCGC TTGACCTCAT CGAGGTTGTT
GTCTTCAACG GGACCGTCAT CGATGTAGCA CCCACGACCG GCAAAGATAC TCTCTACCAT
CTGGTAAGTC TCGAACCCGA ACGGTCCCTG TTCGAGGCGA GCCTTGAACT CGACCGGGTC
ACCGATCCGA TCGGATGCCT GCGCGAGCTG GGCGCGAAAG TCTCACCCAA CCCTTACGAC
CTAGAAGCCG TGAAACCCGT TGTCACGTTC GATCTCCGCC GATTCAGGCT CGCCAACGAT
GCGGCCGAAC TAGCCGATCT AGACTCCCGA CCGAACCTCA TGGAACTCAC CCCGAGCGAG
TTCGAGAAAC TCATCGAAAA ACTTCTCAAG GCCATGGGTA TCGAAGCGTA TCGCACCATC
GACTCCCGCG ACGATGGCAT AGACGTCGTC GCGACTAAAG ACGACATCAT CTTTGGTGGT
GTCTGCCTGG TACAGGCTAA ACGTACCAAG AACCGAGTCG AGCTCGGGAC GGTTCAAGCG
GTCGCTGGCT CCATGAACGA CCACAACGCC GCTACCCCCG ATGTTCAGCA GCAGTCGGTA
CAGGCCCGTG GCCGGTCGAA CAGCCGGCAG CGCCTCGGTG GCGGCCAGGG CATCAGCCGA
GGCGGGAATG CGCAGACCGT CAGCGTCCAG ATCGCCGAAG TAGGCGATCG AGGTGATGCT
GGGCAGCTCT GCGACGGTAA CGGCGGTCAC CGCCTCGTCG AGGCCTTCCT GCGCGCGACG
CTGGTCAGCC TGAGCCTCCA GCAACAGCTG CTGCCCATGG GCGACATCGC GAGGCCGCCG
GTCGACGGGA AGTGCGGTCC ACACCTTGCG GTCGCGGTCG CCGGGGCTCG CCTGCTCCAG
CTGAGTGCGC AGCGCCGAGG TCCGCTCGAG GGCAGTGTTG TGGACGGCGG CGTTCCGGTC
GCGGTCACGC CGAGCCGGGC TACGGCGCTG GCCCGGCCCT CGCGGTCAGC GCCCTCGGTG
CTGGCGAGCA ACCACTCGGC ACGGGCCACG ATCTCCGCCG GTCGGCCAGC GACCGCGGCG
CGGGCACGGG CTGCCACGGT CTCGGCTGAC CTGGCCTCCA ATCGAAGATC TTGCCCCACC
TCTACCGCCA GGTAG
|
|---|
| Protein sequence | MAQSGGGQSE WQQRRAAAAG AEREAARQRK REATARAKQD EREREQAQRQ QSVDDDNAAA
AAHIAELGRN LLLNVLGLPA FTVAALEVVP EQSIFQPGSL AVAGRAPDWE QYKPPAPGRA
SRLVGGSGRY QREFDAARSK WEADTAEFQR VETDRLRQLA AARTRHGQQV AAALDRAAAH
NARIAAQWAA CLDGDPEAVE WFVGQALAAT SYPDGFPVAR KVAYRPQEHD IVIEIEFPRR
SVIPEIRGYK LFKTAPEVRP VKWKESEVKK LYAQLVAWIT LRIVHEVFEA TKALDLIEVV
VFNGTVIDVA PTTGKDTLYH LVSLEPERSL FEASLELDRV TDPIGCLREL GAKVSPNPYD
LEAVKPVVTF DLRRFRLAND AAELADLDSR PNLMELTPSE FEKLIEKLLK AMGIEAYRTI
DSRDDGIDVV ATKDDIIFGG VCLVQAKRTK NRVELGTVQA VAGSMNDHNA ATPDVQQQSV
QARGRSNSRQ RLGGGQGISR GGNAQTVSVQ IAEVGDRGDA GQLCDGNGGH RLVEAFLRAT
LVSLSLQQQL LPMGDIARPP VDGKCGPHLA VAVAGARLLQ LSAQRRGPLE GSVVDGGVPV
AVTPSRATAL ARPSRSAPSV LASNHSARAT ISAGRPATAA RARAATVSAD LASNRRSCPT
STAR
|
|---|
| |