Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7060 |
Symbol | |
ID | 5675370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8614358 |
End bp | 8616631 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641245905 |
Product | large subunit of N,N-dimethylformamidase |
Protein accession | YP_001511296 |
Protein GI | 158318788 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCGG AAGGCTGTTC TGTAACGTCG CCGGTCTGGG TTCTCGGATA CTCTGACGAA ATCATCGTGC GGCCCGGGCA GGACCTGACC TTCCGGGTCG GCGGGCAGGG GGTCGACACG TTTCACGCCC ACCTTGTCCG GTTGCGCCAC GGCGACACCA CTCCGGGTGG CCCGGGATTT CGCGAGACTG AGCTCGACTC CGAGGTCAAC GGAGTTTATC CGCTATTGGA CCAACCAGCG CATGTCGGGT CGTTCGGCCG GATTCCCGGC GCCCGCGACA TCCTGCGCTC GCCGGACGGT TCACTGACCC TTTTCGCCTT CGTTCAGCCC ACCGCCGACG GCGCCCGGCA GCCGGTGCTC TCCGGCTGGG ACGACGCGAC CTCGACGGGC GTCGCGCTGG TTCTGACCGA TGGGTTGCGT CCCGCTCTCG TGTTCGGCGC GGGCCAGGAT TCCGCCTGCC TCACCGCGCC CACCGGCCTG CAGGCCGGCA CCTGGTACGC GCTGGCGGCA AGCTGGGACG GCGCGACCGG TCAGGCCAGC GTGACCGCGG TGCCGGTGGT GAACGCGTAC AACAGCCGGT TCGGACGGGT GGTGGCCAAC CCCATGGTGG AGATCACCGG CGCCCTTGCT GGCCCACCCG AGATCCCGGC CGTCGACCTG CTCCTCGGCG CTCTGGACAC GACCGACGGC ACTGTCGTGC GGGGGGCATA CAACGGCAAG ATCGCGCTTC CAGCGGTCTA CCGACGGCCT TTGACCGGCG ACGAGGTGCG CCAGTTGGCC GGCAGCGGTA AAGCACCGGC GGTGATCGAA GGGCTCGGAG CCTGGTGGGA CCTGTCCACC GGAATCGAGG GCACCGAGAT CGCGCCCGGC GACCGCGGTG AAGGTGAACG TGTCGCCGGC AGTCTGGTGA ACATGCCCAC TCGCGCCGTG ACCGCCCACA ACTGGGACGG TTCCTCATAC AACTGGACGG CCCATCCCGA GTTGTACGGC GCGGTGCACT TTCACACCGA CGACGTCGAC GACACCGGCT GGGCGCCGAC CTGCACGCTG TCGGTGGGCG CCGACCTGCC ATCGGGCGTA TACGCACTGC GGCTACGGGC GGGCGGCTTC GAGGACCATG TGCCGTTCCT GGTCGGCGCC GCTCAGGGCG AGGAGAAATC GATCGCCCTG CTGCTGCCGA CCGCGAGTTA CCAGGCCTAC GCCAACGAGC ATCTGGGCAG CGGTTCACCG ATCGGGCAGG CGGTCGGCGG GCACACGCCC CTGGTGCAGC CGCTGGACGT GCTCAAGCTC GAACACGGCG AGTTCGGACG CTCGACCTAC GACCTGCATG TCGACGGCAG CGGCGTCGCC TACACCTCGC GGCGCCGGCC GATCCTGAAC ATGCGCCCGC GGTACCGGTT CACGCATCTG GGCACCTGGC AGTTCCCCGC GGACCTTTAT CTCGTCGACT GGCTGACCGA GAAGGGATAC GAGTTCGACG TCCTCTGTGA CGAGGATGTC CACCGACGTG GCGTGGACGC GATGCGGCCC TATCGGGTGG TCATGACCGG CACCCATCCC GAATACACCT CAGAACGGAT GCTCGATTCC TTCGAGGACT ACGTCGTCGA TGGCGGGCGC GTGATGTACA TGGGCGGCAA CGGGTTCTAC TGGGTCGTGT CCTTCCATCC GGAGAAGCCC TGGGTCATGG AGGTCCGCAA GGGTGAGGCT GGTTCGCGGG CCTGGCAGGC CGCGCCCGGG GAGACCCTCC ACTCCACCAC CGGCGAGAAG GGCGGCCTGT GGCGAAACCG TGGCCGCGCT CCGCAGAAGG TCTTCGGCAC CGGGTTCACA GCGGAGGGGT TCAACGGGTC CTCGTACTAC CGGCGGATGC CGGACAGCGC CGAGGCAGCG GTGTCCTGGG TCTTCTCCGG TGTCGGCGAG GAGGAACTGA TCGGTGACTT CGGCCTGGAG GGCGCCGGCG CCGCCGGCCA GGAACTGGAC CGCGCCGACG TCCGGCTGGG CACCCCACCG GGCACCTACC TGCTCGCCTC CTCGGAGTAC CACGACGACT CCTACCTGCT GGTGGTAGAA GAGATCGGTT TCATGTACCC GGGGCTCGGC GGCAGCGAGC ACCGAGACGT CCGCGCGGAC ATGACCCTGT TCGAGACCGA ATCAGGCGGC GCTGTCTTTT CGACCTCGTC GATTGCCTGG GCGGGAAGCC TCTCTCACAA CGACTACGAC AACAACGTCG CGCGCATCAC CGCCAACGTT CTCGATCGCT TCTCGACGTT GTGA
|
Protein sequence | MSAEGCSVTS PVWVLGYSDE IIVRPGQDLT FRVGGQGVDT FHAHLVRLRH GDTTPGGPGF RETELDSEVN GVYPLLDQPA HVGSFGRIPG ARDILRSPDG SLTLFAFVQP TADGARQPVL SGWDDATSTG VALVLTDGLR PALVFGAGQD SACLTAPTGL QAGTWYALAA SWDGATGQAS VTAVPVVNAY NSRFGRVVAN PMVEITGALA GPPEIPAVDL LLGALDTTDG TVVRGAYNGK IALPAVYRRP LTGDEVRQLA GSGKAPAVIE GLGAWWDLST GIEGTEIAPG DRGEGERVAG SLVNMPTRAV TAHNWDGSSY NWTAHPELYG AVHFHTDDVD DTGWAPTCTL SVGADLPSGV YALRLRAGGF EDHVPFLVGA AQGEEKSIAL LLPTASYQAY ANEHLGSGSP IGQAVGGHTP LVQPLDVLKL EHGEFGRSTY DLHVDGSGVA YTSRRRPILN MRPRYRFTHL GTWQFPADLY LVDWLTEKGY EFDVLCDEDV HRRGVDAMRP YRVVMTGTHP EYTSERMLDS FEDYVVDGGR VMYMGGNGFY WVVSFHPEKP WVMEVRKGEA GSRAWQAAPG ETLHSTTGEK GGLWRNRGRA PQKVFGTGFT AEGFNGSSYY RRMPDSAEAA VSWVFSGVGE EELIGDFGLE GAGAAGQELD RADVRLGTPP GTYLLASSEY HDDSYLLVVE EIGFMYPGLG GSEHRDVRAD MTLFETESGG AVFSTSSIAW AGSLSHNDYD NNVARITANV LDRFSTL
|
| |