| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7032 |
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| Symbol | |
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| ID | 5675343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8579736 |
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| End bp | 8580827 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641245878 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001511269 |
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| Protein GI | 158318761 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC AGGAAGGGAT GCGGTGGACG GCATCCGGGC GGGTATCTGG ATCGCCTCGC
CGTCGCGCCA TCGCAGCGCT GGTGCTGGTG CTCGCCGCTG CGCTGGTCCT GTTCCGGTGC
GGCGGCTCCT CGGTCCAGGT CACGGATGGC CGGCAGGGCT CCGGTGGCAA CCCGACTGTT
GGGCTGATCA CGAAGTCTTA CACTAACCCG TTCTTCGTGA AGATGCGCGA CGGCGCGCAG
CAGGCCGCGC GGGAGCAGAA GGTTGAGCTG TTGACCGCCA CCGGCAGGTT CGACGGCGAC
TATGCCAGTC AAGTCAGCGC CATCGAGAAC ATGGTAGCGG CCGGGGCGCG GGGCATCCTC
ATCACACCCA ATGACAGCAA GGCGATCGTC CCGGCGATCG AGCAGGCCCG GCACCGTGGT
GTTCTCGTCA TCGCTCTAGA CGTGCCCACC GACCCGGAGA GCGCCGTCGA CGCGCTGTTT
AGCACCGACA ACTTCAAGGC CGGCATACTG ATCGGCGAGT ACGCCAGGGC CGCTATGGGC
GACACGCCGG CCAGGATCGC AACCATGGAC GTCTCTTCGC ACATCACGGG CGGAGGCCTG
CTGCGACACA ACGGTTTCCT CGTCGGCTTC GGCGCCTTGG ACGTGACTGT CAGTGAGACT
CAGCAGGCCA CTCCGCCGAG CGTGGTGTGC AGCCGGGATT CCAAGGGTGA CCAGGCCAAG
GGGCGGACGG CGATGGCGGA CTGTCTGCGG ACGGACCCGG ACATCAACCT CGTGTACGCC
GTGAACGAAC CGGCCGCGTT CGGCGCGCGG ACCGCCCTGG ACGCGGCCGG AAAGGCAGAC
GTCATGATCG TCTCCATCGA CGGCGGATGC ACCGGCGTCC GGGCGGTCAG GGACGGCAAG
ATCGCTGCTA CCTCACAGCA GTACCCGCTG AAGATGGCCG AGCAGGGAGT GGCCGCCGTG
GTCGACTACG TCAAGGACGG AACGAAAGTA TCCGGATACG TCGACACCGG CACCACCCTG
ATCGCCGACG ATCGTCAGCC TGGAATCCCT TCGGAAGGCG TCGAGTACGG TCTGGCGAAT
TGCTGGGGCT GA
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| Protein sequence | MSDQEGMRWT ASGRVSGSPR RRAIAALVLV LAAALVLFRC GGSSVQVTDG RQGSGGNPTV
GLITKSYTNP FFVKMRDGAQ QAAREQKVEL LTATGRFDGD YASQVSAIEN MVAAGARGIL
ITPNDSKAIV PAIEQARHRG VLVIALDVPT DPESAVDALF STDNFKAGIL IGEYARAAMG
DTPARIATMD VSSHITGGGL LRHNGFLVGF GALDVTVSET QQATPPSVVC SRDSKGDQAK
GRTAMADCLR TDPDINLVYA VNEPAAFGAR TALDAAGKAD VMIVSIDGGC TGVRAVRDGK
IAATSQQYPL KMAEQGVAAV VDYVKDGTKV SGYVDTGTTL IADDRQPGIP SEGVEYGLAN
CWG
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