| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7025 |
|---|
| Symbol | |
|---|
| ID | 5675336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8568149 |
|---|
| End bp | 8569156 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641245871 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001511262 |
|---|
| Protein GI | 158318754 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.560665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAA CGAAGGCTGC CGGGGCTGAG ATAAAGCTCC GTGGCAGCGT CGGCTCATTC
GCCAAACATG CACCGGACCT GACCACCCTC GGCCCGGTGA TCGCCCTGGT GCTGGCCGGA
TTATTCTTCA GTATCAAGTC CGACCGGTTC CTGACCGGCG GGAACTTTTC CCTTATTCTC
CAGCAGGTCA TGGTGGTCGG CACCCTCGCG ATCGGCCAAA CCCTGATCAT CCTGACCGCC
GGCATCGACC TGTCCAACGG CGCCATCATG GCTCTGGGTA ACGTCCTCAT AACGACGCTC
GCGGTCGATG CTGGGCTCAA CCCATTCCTG GCGATCGGTC TCGGTCTACT GGCCTGTACC
GCCTTTGGGC TCCTCAACGG CGGTTTGGTT ACCACGATTC GGCTGCCACC ATTTATCGTC
ACACTCGGTA CGTTAAATAT CGCTTTCGCG TTGACTCATA TCTACTCCAA TGAGGAGACT
ATTTCCGACC TACCCGCAAC GCTCACCTAT CTTGGGAAGA CGTTCACCGT CGGCCAGACA
GAAATCACCT ATGGTTCCTT GCTAATGCTC GCCCTGTTCG GAATCACTTG GTGCATTCTG
ACCCAGACTT CCGCCGGTCG GCACATCTAC GCCGTCGGTG ACAACCCTGA GGCTGCCCGC
CTAACGGGCA TCCGGACCCG GCGGGTCGTT CTCACCGTCT ACGCTGTCGC CGGCCTTATC
TACGGCATCG CATCCCTGCT GCTCGTGTCC CGTACCGGCG TCGGCGATCC CAACGCAGGG
CAGACCGACA ACCTGGACAG CATCACGGCT GTCGTGCTCG GCGGAACCAG CCTGTTTGGC
GGCCGCGGCA GCGTGGTCGG CACGCTCCTG GGCGCGCTCA TCGTCGGCGT TGTCCGCAAC
GGCCTGCAGC TCATCGGCAC CAAATCCATC TACCAGGTGC TCATCACTGG CATTCTGGTC
ATCCTCGCCG TGGCCATTGA CCAACTCGCT CGCAGGAGGA AAGCATGA
|
|---|
| Protein sequence | MASTKAAGAE IKLRGSVGSF AKHAPDLTTL GPVIALVLAG LFFSIKSDRF LTGGNFSLIL
QQVMVVGTLA IGQTLIILTA GIDLSNGAIM ALGNVLITTL AVDAGLNPFL AIGLGLLACT
AFGLLNGGLV TTIRLPPFIV TLGTLNIAFA LTHIYSNEET ISDLPATLTY LGKTFTVGQT
EITYGSLLML ALFGITWCIL TQTSAGRHIY AVGDNPEAAR LTGIRTRRVV LTVYAVAGLI
YGIASLLLVS RTGVGDPNAG QTDNLDSITA VVLGGTSLFG GRGSVVGTLL GALIVGVVRN
GLQLIGTKSI YQVLITGILV ILAVAIDQLA RRRKA
|
|---|
| |