Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7020 |
Symbol | |
ID | 5675331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8561905 |
End bp | 8562576 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641245866 |
Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
Protein accession | YP_001511257 |
Protein GI | 158318749 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.963439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGA TCTCACGCCC TTCGTCCCTG CTCAACATCG CGCCAGTGAT ACCCGTCGTC GTCGTGCATG ACATCCGAAC AGCGGTGCCG CTCGCCCGTG CTCTCGTCGC TGGAGGCCTG CATATCCTGG AGGTGACACT ACGCACCGAC GCAGCCCTAC AGGCGATCGA GTTGATCACG GCGGAAGTGC CGGACATTCT CGTTGGCGCT GGAACGATCA CCTCAAGCGA TCAGGCAAGG CAGTCCGTGG ACGCCGGCGC ACACTTCCTG GTCAGCCCCG GATGCACCGA CCGGCTGCTA GACGCGATGG ACGACAGCGG CCTGCCTTAT CTACCCGGTG TCGCTACCGT CTCGGAGATG CTTAAGGTTC TCGACCGCAG GAAGGTCGAG ATGAAGTTCT TCCCCGCCGG GGCTGCAGGA GGCATCCCCT ACCTCCAAGC GGTAGCGGGA CCGCTACCAC AAATCCGATT CTGCCCGACT GGCGGCATCA CCGCTGCTAC GGTTGGGGCC TATCTGGGCG AGCCAAATGT CGGATGCGTC GGCGGATCTT GGGTGACACC ACCCGATGCC ATCTGGGAAG GCGATTGGAA ACAGATCACG CAACTTGCCC GCGGCGTGGC ATCATGGCCG AACCGAGACG GCATGGGCCA TCGGTCAATG CCACTTAAGT AA
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Protein sequence | MTSISRPSSL LNIAPVIPVV VVHDIRTAVP LARALVAGGL HILEVTLRTD AALQAIELIT AEVPDILVGA GTITSSDQAR QSVDAGAHFL VSPGCTDRLL DAMDDSGLPY LPGVATVSEM LKVLDRRKVE MKFFPAGAAG GIPYLQAVAG PLPQIRFCPT GGITAATVGA YLGEPNVGCV GGSWVTPPDA IWEGDWKQIT QLARGVASWP NRDGMGHRSM PLK
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