Gene Franean1_7020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7020 
Symbol 
ID5675331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8561905 
End bp8562576 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID641245866 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_001511257 
Protein GI158318749 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.963439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCTCACGCCC TTCGTCCCTG CTCAACATCG CGCCAGTGAT ACCCGTCGTC 
GTCGTGCATG ACATCCGAAC AGCGGTGCCG CTCGCCCGTG CTCTCGTCGC TGGAGGCCTG
CATATCCTGG AGGTGACACT ACGCACCGAC GCAGCCCTAC AGGCGATCGA GTTGATCACG
GCGGAAGTGC CGGACATTCT CGTTGGCGCT GGAACGATCA CCTCAAGCGA TCAGGCAAGG
CAGTCCGTGG ACGCCGGCGC ACACTTCCTG GTCAGCCCCG GATGCACCGA CCGGCTGCTA
GACGCGATGG ACGACAGCGG CCTGCCTTAT CTACCCGGTG TCGCTACCGT CTCGGAGATG
CTTAAGGTTC TCGACCGCAG GAAGGTCGAG ATGAAGTTCT TCCCCGCCGG GGCTGCAGGA
GGCATCCCCT ACCTCCAAGC GGTAGCGGGA CCGCTACCAC AAATCCGATT CTGCCCGACT
GGCGGCATCA CCGCTGCTAC GGTTGGGGCC TATCTGGGCG AGCCAAATGT CGGATGCGTC
GGCGGATCTT GGGTGACACC ACCCGATGCC ATCTGGGAAG GCGATTGGAA ACAGATCACG
CAACTTGCCC GCGGCGTGGC ATCATGGCCG AACCGAGACG GCATGGGCCA TCGGTCAATG
CCACTTAAGT AA
 
Protein sequence
MTSISRPSSL LNIAPVIPVV VVHDIRTAVP LARALVAGGL HILEVTLRTD AALQAIELIT 
AEVPDILVGA GTITSSDQAR QSVDAGAHFL VSPGCTDRLL DAMDDSGLPY LPGVATVSEM
LKVLDRRKVE MKFFPAGAAG GIPYLQAVAG PLPQIRFCPT GGITAATVGA YLGEPNVGCV
GGSWVTPPDA IWEGDWKQIT QLARGVASWP NRDGMGHRSM PLK