| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7019 |
|---|
| Symbol | |
|---|
| ID | 5675330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8560252 |
|---|
| End bp | 8561619 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641245865 |
|---|
| Product | alpha-L-arabinofuranosidase B |
|---|
| Protein accession | YP_001511256 |
|---|
| Protein GI | 158318748 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGTTA GTCCTGACCA TCGACGATGG AACCTGAATT ATCTGCGTCC GTCCAAGCCC
ACGGCCCCGG CCCCGGAGGC TACACTCAGC CTGACAGGAA CAGAAAGTGG AGGCCTCCCC
GCACTCGGCA GGACATCCCG ATACACGATG ACGGCGTGTA TCCAGGCCAG CGACAGCACC
ATGTATGTGT ATGAGTCCTC GGACGCCACC GGGTTCGGGC TGCTGAGGGA TTCCGGATAC
ACACCCCCAT GGGGAATGGT TCGCGATCCC AGCATCATGC GGCACACCGA CGGGATGTAC
TACGTCGCCC ACAGCACTGC TCGGGCCGGA AACCAGATCG GCCTCGCCTC AAGTACCGAC
CGAGTCAGCT GGACCTTCCT CGGCAACGTC ACGCTGACGG CGTCCCGAGT CGGAAGTGTC
TGGGCCCCAG AATGGTTCAT CGACGCCGAT GGCAGCGTCA ACATAATCGT CTCCCTGCGG
TTCGGTGGCA GCGCACGGGG CGCTTTTCGG CCGTACAAGA TAACGGCAAC GGACTCCTCT
CTTACCACAT GGAGTATCCC GACGCCGTTG GTTGGCTTAC CTGCAGGTTC CATCGAACTG
TTCATTGTCA GGGTCGGATC GACGCGCCAC GCATTCTATA AGAATAGCCG TTCGATGCGT
ATCGAGTTGG CGAGCGCGCC TAGCCTCACC GGCCCATACA CGATCTGGAG ATCGCCGGAC
TTTGTCGCCG GGGACGGCCA GGGGCCGGCT CTTATACCCC TGGACAACGG CGGTTGGCGA
CTATATTTCG AGCATTGCAG GCAGGGCGGA GTCTGGTTTA TCGACAGCTA TGACACCTTT
CGTACCTGGT CCGCACCGGT CGAGCTTCCG GGACTGACCG GTGTCGTGAA ACATCTGACC
GTTGTGAAGG AGGTGGTCGC GGGTGGCCCG ACCCTTCCCC TGGGCAGACT TTCGCTGAGA
TCGGCCGATC TCGGGCACCA GTACTGGCGG CTGGTCGACG ACATCGGCTG TATAGAGGTG
GTTTCGTCGG TCAGCAGCAC CGCTGTCCGA CGCGAAGCGA CCTTCACCGT CGTGCGTGGC
CTCGCCGATC CAAACGGGTT CTCGTTGCGC GCATCCGACG GCCGGTTCTT GCGACAGGAC
GGATCCCGGC TGCGGCTGGG CGGGTTTGGC GCGACCCAGT CCTTCGACCG AGATGCCACG
TTCGTGGTCC GACGTGGCTT AGGTGCCAGG TCAGTGGCCC TAGAATCCTA TAGCCATCCG
GGCCGGTATA TTCGCCGTGG CGGCCGGGAA CTCTGGATTG ATCTGTATAA TGACAGCTAC
CGCTTCCGCG CGGAGACCTC CTTCGCCATC ACGGACGCCT GGTCCTGA
|
|---|
| Protein sequence | MIVSPDHRRW NLNYLRPSKP TAPAPEATLS LTGTESGGLP ALGRTSRYTM TACIQASDST
MYVYESSDAT GFGLLRDSGY TPPWGMVRDP SIMRHTDGMY YVAHSTARAG NQIGLASSTD
RVSWTFLGNV TLTASRVGSV WAPEWFIDAD GSVNIIVSLR FGGSARGAFR PYKITATDSS
LTTWSIPTPL VGLPAGSIEL FIVRVGSTRH AFYKNSRSMR IELASAPSLT GPYTIWRSPD
FVAGDGQGPA LIPLDNGGWR LYFEHCRQGG VWFIDSYDTF RTWSAPVELP GLTGVVKHLT
VVKEVVAGGP TLPLGRLSLR SADLGHQYWR LVDDIGCIEV VSSVSSTAVR REATFTVVRG
LADPNGFSLR ASDGRFLRQD GSRLRLGGFG ATQSFDRDAT FVVRRGLGAR SVALESYSHP
GRYIRRGGRE LWIDLYNDSY RFRAETSFAI TDAWS
|
|---|
| |