Gene Franean1_7019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7019 
Symbol 
ID5675330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8560252 
End bp8561619 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content62% 
IMG OID641245865 
Productalpha-L-arabinofuranosidase B 
Protein accessionYP_001511256 
Protein GI158318748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGTTA GTCCTGACCA TCGACGATGG AACCTGAATT ATCTGCGTCC GTCCAAGCCC 
ACGGCCCCGG CCCCGGAGGC TACACTCAGC CTGACAGGAA CAGAAAGTGG AGGCCTCCCC
GCACTCGGCA GGACATCCCG ATACACGATG ACGGCGTGTA TCCAGGCCAG CGACAGCACC
ATGTATGTGT ATGAGTCCTC GGACGCCACC GGGTTCGGGC TGCTGAGGGA TTCCGGATAC
ACACCCCCAT GGGGAATGGT TCGCGATCCC AGCATCATGC GGCACACCGA CGGGATGTAC
TACGTCGCCC ACAGCACTGC TCGGGCCGGA AACCAGATCG GCCTCGCCTC AAGTACCGAC
CGAGTCAGCT GGACCTTCCT CGGCAACGTC ACGCTGACGG CGTCCCGAGT CGGAAGTGTC
TGGGCCCCAG AATGGTTCAT CGACGCCGAT GGCAGCGTCA ACATAATCGT CTCCCTGCGG
TTCGGTGGCA GCGCACGGGG CGCTTTTCGG CCGTACAAGA TAACGGCAAC GGACTCCTCT
CTTACCACAT GGAGTATCCC GACGCCGTTG GTTGGCTTAC CTGCAGGTTC CATCGAACTG
TTCATTGTCA GGGTCGGATC GACGCGCCAC GCATTCTATA AGAATAGCCG TTCGATGCGT
ATCGAGTTGG CGAGCGCGCC TAGCCTCACC GGCCCATACA CGATCTGGAG ATCGCCGGAC
TTTGTCGCCG GGGACGGCCA GGGGCCGGCT CTTATACCCC TGGACAACGG CGGTTGGCGA
CTATATTTCG AGCATTGCAG GCAGGGCGGA GTCTGGTTTA TCGACAGCTA TGACACCTTT
CGTACCTGGT CCGCACCGGT CGAGCTTCCG GGACTGACCG GTGTCGTGAA ACATCTGACC
GTTGTGAAGG AGGTGGTCGC GGGTGGCCCG ACCCTTCCCC TGGGCAGACT TTCGCTGAGA
TCGGCCGATC TCGGGCACCA GTACTGGCGG CTGGTCGACG ACATCGGCTG TATAGAGGTG
GTTTCGTCGG TCAGCAGCAC CGCTGTCCGA CGCGAAGCGA CCTTCACCGT CGTGCGTGGC
CTCGCCGATC CAAACGGGTT CTCGTTGCGC GCATCCGACG GCCGGTTCTT GCGACAGGAC
GGATCCCGGC TGCGGCTGGG CGGGTTTGGC GCGACCCAGT CCTTCGACCG AGATGCCACG
TTCGTGGTCC GACGTGGCTT AGGTGCCAGG TCAGTGGCCC TAGAATCCTA TAGCCATCCG
GGCCGGTATA TTCGCCGTGG CGGCCGGGAA CTCTGGATTG ATCTGTATAA TGACAGCTAC
CGCTTCCGCG CGGAGACCTC CTTCGCCATC ACGGACGCCT GGTCCTGA
 
Protein sequence
MIVSPDHRRW NLNYLRPSKP TAPAPEATLS LTGTESGGLP ALGRTSRYTM TACIQASDST 
MYVYESSDAT GFGLLRDSGY TPPWGMVRDP SIMRHTDGMY YVAHSTARAG NQIGLASSTD
RVSWTFLGNV TLTASRVGSV WAPEWFIDAD GSVNIIVSLR FGGSARGAFR PYKITATDSS
LTTWSIPTPL VGLPAGSIEL FIVRVGSTRH AFYKNSRSMR IELASAPSLT GPYTIWRSPD
FVAGDGQGPA LIPLDNGGWR LYFEHCRQGG VWFIDSYDTF RTWSAPVELP GLTGVVKHLT
VVKEVVAGGP TLPLGRLSLR SADLGHQYWR LVDDIGCIEV VSSVSSTAVR REATFTVVRG
LADPNGFSLR ASDGRFLRQD GSRLRLGGFG ATQSFDRDAT FVVRRGLGAR SVALESYSHP
GRYIRRGGRE LWIDLYNDSY RFRAETSFAI TDAWS