Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7001 |
Symbol | |
ID | 5675312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8531462 |
End bp | 8534125 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641245847 |
Product | hypothetical protein |
Protein accession | YP_001511238 |
Protein GI | 158318730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.890156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTGA AGCAGCTGTA CTACACGTCG TGCGAGGTCG GCCTTTCGGG ATACCCCGGA TTCCAGTTCA ATGCGGCGAG CCGCGGGGTC GCTCCGGAGG TGATGCGGCG GGTCGAGTCC TTCACCGCCT ACGACCCGCC GGGCTCGCTG CCCTACAACG CGGATGCCGC GGCGCTCGCG GCCTGCCCGG TGAATCTCTG CTTCGAGCCG GCGGAGGACA CCGGCGTGCT GGCGAACGTC GTCTTCGTGG GCACGGACTA CTCGAACCGG TTCGGGAACT ACTTCGCGCA CGCGTTGGTC AGCGAGGACG TCGCCACCGA TCTCGGGGAG GCGTTGCCCA TCGAGCTGTG GGGCGCCCCG ATCTGGACGG CCAGCCCGAA GACCGACGGC GCGGAACTGC CGGAGCTGGC CGGGCCGCCG CCACGGGGAA GGCTCGACCG CCGGCACGTC GCCGCCTTCC TGCGTACGCA TCCCGGCCGC GCCGCACTGC CCGCCCTGGT GTCCGCGGCG GCCAGGGTGA TCACCGGCGA ACGGCGAACG ATCGTGCTGA TCGAGCGGGA CAGCGGGGCC GCCGCGAACT GGATCGGCGC CGTCTCCTAC CTGCTGCCGC CGGCGCTGGC CCGCCGGATG TCCTTCGCCA CCTACCACCA CCGGCCCGCC TACAGCGACC TGCACCTGGT CGCGACAGTG CCCGACGCCG ACGTCGACCG CGGTGACGGC GCGTTCGCGA GCTTCCTCCA GTTCGACATT CCGGCCAACC GGAGCAGCCA GGTGCCGGTC GAGCCGTGGG CCGCCCTGCT GGCCGAGACC GGCGTGGAGA ACGCGGCCGA GCTGTGGGCC GCCGCGGCCG AGCTCGGCGG CGGCCTGCCC GTCCGCTCGG GAGAGTGGCA TCCGCTGCTG GCCGCGGCGC TGTTCCGGCA CGGTCACCAG GCCTCCGGCG CCGGGCCGGC GGTGACGGCC GCCGCCGCGA CCGCCGCGCG CTGGCTGGGG CGCCAGGCAC CCTCGCTGGA CGCGCGAACT ATCGAACTGA TCGGCGTCGG GGCCCTGGGG GTCCTCGCCG GGAGCCGGCC GCCCGGCACC GGCGCCGCAC TCACCGCCCT CGCGGCGGCC GCGGCGGAGG CCGGCGCCGC GCCGCTGGCC ACCGAGATCG AGAAGCTGGC GGTGGACATC GAGGTGGACG GGCTGCTGGC GCACGAGCCC GTCAAGGGTG CCGGTGGCGC CGAAGCGGTG CCGCTCAGGT CGCCTGCCGG TCGCGCCCAC GCCACCGACC GCTGCACGCG AGCCCTGCGC AGATGCACCG CCGAGGTGGC GGTCGATCTG CTCCTCCTGG CTGCCCGGGA GCGGCTCGAC CTGGACAGCG CCCTGCTGCG GACGGCCGGA GAACGCGTCG TCGGCCCCCG GCTGCTGGCC GAGCCGACCG AGGCGACGGC ACGGCTGGCA CGTGGCTGGC CCCAGCTGCG GGCGGGGGTG GTGCATCACC TCGCCGCGGT CGCGGCACGC GAGCCGGACC GTCTCGTCGA GGCGCTCACG CACGGCCTCG GTGAGGCGCT GGACGACGAC GACACGCGTG CTGCCCCGGC TCTGCACGAA GCCCGGCTGA TCGCCGCGTC CCGCCGCGAC CCGCGGCTGC GGATCGACAT GCTGGCGGAG ATCGCGATGC TGCGGGCAAG CGGTCCGGAA TCGACGGGCA CACCGGCCGT GGACGCGGAC CTGTTGCGGC GCGTCTGGCC GCACGGAAGC TGGACGCCGG GCGAGGCACT GCGCGCACTT GAGGTGCTCG ACGAAGCCAG CCTGAATGCT CCCGCCACCG TGGCCTGGCT GAACGCCGTC CTCACCCGCG AGTGGCCGGC GACGGCCGCA GCGGACGGCG ACCATCTCGA GGACCTCGAA GCCCTCTGCC ACGCGTTCGA GGGGAGGCCA GCCGCGTCCC GGCTCAGTGA CCCCGCACGC GCGACGATCA CCCGGATGAC CACGGTCAGA CGCAGGCTGG CCGCTGCCAC CGGCCCTGGC CGCCAGGCCG CCGTCCTGAC CGCCGGGCTC GACCGGATGC CCGAGACGCA GCGGGCACAC CACCTCAGCA AACTGACCGA CCTGCTGAAC AAGGCACCGG CCGGGGACCT CCCCGAGATC TTCGCGTCGT GCCCCGCGGA GGCCGTGGAG CACTACCTGC TCGACGTCGA CACCTATCTC AGGGCCGACC GTGCCCAGAC GGACATCGCC GGCCGTCTCT TCTACGCGGT GGTCATCCTG CGGCGCAATC CGTCCCGCAA GGTCCGCGTC GTCGCCACGG TCATCGAGGA CCGCCTGCTG GACAGGCTGA TCACATGGCA CTGGCAGGAC CTGCGCGCCC TGCATGTCTG GATCAGGAAG CTCGATCCCG CGGTGGCCAC GGATTTCGCC AACTGGCGGG ACCTCAACGC CGCCGGATGG CTGCGCCGGA CCCTGACGCG GCGTCGGCTG GAGAAGGAGG CCGACGCGCC ACGGAGGGCG GCGGAGAAGA AGGCCCGGGC CGAGCGGAAG GCCGCGGCGG AGAAGAAGGC CGCCGCCGCA CAGAAGGCCG CCGACAAGAA ACGCTCGGGA AGCGGAGGGA AGAACGGTAA GAACGGGAAA TCTGGGACGG AAGCCCAAGG GAAGGCTGCG GCGAAAAAAC GGAACCCTCG TTAG
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Protein sequence | MVLKQLYYTS CEVGLSGYPG FQFNAASRGV APEVMRRVES FTAYDPPGSL PYNADAAALA ACPVNLCFEP AEDTGVLANV VFVGTDYSNR FGNYFAHALV SEDVATDLGE ALPIELWGAP IWTASPKTDG AELPELAGPP PRGRLDRRHV AAFLRTHPGR AALPALVSAA ARVITGERRT IVLIERDSGA AANWIGAVSY LLPPALARRM SFATYHHRPA YSDLHLVATV PDADVDRGDG AFASFLQFDI PANRSSQVPV EPWAALLAET GVENAAELWA AAAELGGGLP VRSGEWHPLL AAALFRHGHQ ASGAGPAVTA AAATAARWLG RQAPSLDART IELIGVGALG VLAGSRPPGT GAALTALAAA AAEAGAAPLA TEIEKLAVDI EVDGLLAHEP VKGAGGAEAV PLRSPAGRAH ATDRCTRALR RCTAEVAVDL LLLAARERLD LDSALLRTAG ERVVGPRLLA EPTEATARLA RGWPQLRAGV VHHLAAVAAR EPDRLVEALT HGLGEALDDD DTRAAPALHE ARLIAASRRD PRLRIDMLAE IAMLRASGPE STGTPAVDAD LLRRVWPHGS WTPGEALRAL EVLDEASLNA PATVAWLNAV LTREWPATAA ADGDHLEDLE ALCHAFEGRP AASRLSDPAR ATITRMTTVR RRLAAATGPG RQAAVLTAGL DRMPETQRAH HLSKLTDLLN KAPAGDLPEI FASCPAEAVE HYLLDVDTYL RADRAQTDIA GRLFYAVVIL RRNPSRKVRV VATVIEDRLL DRLITWHWQD LRALHVWIRK LDPAVATDFA NWRDLNAAGW LRRTLTRRRL EKEADAPRRA AEKKARAERK AAAEKKAAAA QKAADKKRSG SGGKNGKNGK SGTEAQGKAA AKKRNPR
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