Gene Franean1_6991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6991 
Symbol 
ID5675302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8513636 
End bp8514556 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID641245837 
Productluciferase family protein 
Protein accessionYP_001511228 
Protein GI158318720 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA CCGGCCCGAC GGTGGGCCTG ATGCTTCCCA CGGTGGCGAA CCCGGACACG 
GGCGCGGTCG ACACCGCGCG GGTGGTCGAG GCGGCCCGGC GGGCGGAGGT GGCCGGTTTC
GACGGCGTCT ACATCGGCGA TCACCTGCTG CACCCGCATC CGATGCTGGA GTCGGTCGTC
ACCCTTTCCG TCGTGGCGGC GCGGACCGAG CGGGTTTCGT TCGGGCCGTG CGTGATGCTC
ATGGGCCTGC GGAATCCCGT GGCCCTGGCG AAACAGCTCG GAACACTGGC GGCGTTCGCT
CCGGGCCGCC TGCGCGTCGG AGTCGGCGTA GGGGGCGAAT ACCCCGGCGA GTTCGAGGTG
GCGGGTGTCG CGCTGCCGGA GCGCGGACGT CGCATGGAGT CGGTTCTCGG CCAGGTGCAG
TCGCTGCTGA GATCGGGCGC GCAGCGTCCG GACGTGACAA TCGCGCCGGG CGCGCCGGAC
GTCCCATTCC TCCTCGCGGG CTGGAAAGAG GTGTCGCTGC GCCGGGCGGC GACGTACGGA
GACGGCTGGA TCGGTTATCT CCTCGCCCCC GACAGCTTCG CGCGGCGCCG GGCCTTTCTG
CTCGAGCATC GGGAGAAGCT GGGGCGGGTC GAGGTCCCTT TCACGACTGG AATGCTCGTC
CCGGTACACG TGGATCCGTC GGGTGGTGCC GCGGTGAGCG CCGCGGCCGC GTGGGCGAAG
ATCACCGACT CCGAGGCCGG GTTCCCGGCG CGGCTGTTCG CCGCCGGCCG GCCGGGCGAG
GTTGTCGAGC AGCTGCACCG CTACTGGGCG GCCGGCTGCA CCGAGCTCGT CCTGGCGCCG
GCCGATCAGG GCGAGGGCTA CCTCGAGCAG GTGATCATGC TGGCTGGGGA GGTACTTCCA
CAGGTGAAGG CCTTCTCATA G
 
Protein sequence
MTTTGPTVGL MLPTVANPDT GAVDTARVVE AARRAEVAGF DGVYIGDHLL HPHPMLESVV 
TLSVVAARTE RVSFGPCVML MGLRNPVALA KQLGTLAAFA PGRLRVGVGV GGEYPGEFEV
AGVALPERGR RMESVLGQVQ SLLRSGAQRP DVTIAPGAPD VPFLLAGWKE VSLRRAATYG
DGWIGYLLAP DSFARRRAFL LEHREKLGRV EVPFTTGMLV PVHVDPSGGA AVSAAAAWAK
ITDSEAGFPA RLFAAGRPGE VVEQLHRYWA AGCTELVLAP ADQGEGYLEQ VIMLAGEVLP
QVKAFS