| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6983 |
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| Symbol | |
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| ID | 5675295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8505625 |
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| End bp | 8506410 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641245831 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001511222 |
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| Protein GI | 158318714 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA GTGACCGGCT CGACGGCCGC CCCGCGCTGG TCACCGGAGC CAGCAAGGGC
ACCGGCGCCG CCATCGCCGA CCGGCTCCGC GAGGCCGGCG CGATCGTGCT GGCCACCGCC
CGCACCCGCC CGTCCGGCCA GGCCGGGCCG GACCTGTTCA TCCCCGCCGA CCTCACCACC
ACCGAGGGCG TCGCCGCCGT CGTCGACCAG GTGCGGAACC GGTTCGGCAC GCTGGACATC
GTCGTGCACA CCCTCGGCGG ATCGCAGGCC CCACCCGGGG GTTTCGCCGC CCTCACCGAT
CAGCACTGGG ACCACGAGCT GCGTCTCAAC CTGCTCGCCG CCGTCCGGCT GGACCGTGCC
CTGCTGCCGG CGATGATCGA CGCCGGCGGC GGGGCGGTGG TGCACGTGTC GTCCATCCAA
CGGCGAATGC CGCTGTACGA GGCGACCCTC GGCTACGCGG CGGCCAAGGC CGCGCTCACC
ACCTACAGCA AGGGCCTGGC CAACGAGGTC GGTCCGCGTG GCGTTCGGGT GAACGTCGTG
TCCCCCGGCT TCATCCAGAC CGCCGGCGCC GACGGTCTGA TCGATCGCAT CGCAGCGAGC
CAGGCCATCT CCCGCGGGCA GGCGCTGGAG CAGGTCATGG ATTCCCTCGG CGGCATCCCA
CTCGGCCGCC CCGCGCAGCC CACCGAGGTC GCCGAACTCG TTGCCTTCCT CGTGTCCGAC
CGTGCGGCCG CCATCACCGG CGCCGAGCAC ACCGTCGACG GCGGCACGGT GCCGACCATC
GGCTGA
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| Protein sequence | MTISDRLDGR PALVTGASKG TGAAIADRLR EAGAIVLATA RTRPSGQAGP DLFIPADLTT
TEGVAAVVDQ VRNRFGTLDI VVHTLGGSQA PPGGFAALTD QHWDHELRLN LLAAVRLDRA
LLPAMIDAGG GAVVHVSSIQ RRMPLYEATL GYAAAKAALT TYSKGLANEV GPRGVRVNVV
SPGFIQTAGA DGLIDRIAAS QAISRGQALE QVMDSLGGIP LGRPAQPTEV AELVAFLVSD
RAAAITGAEH TVDGGTVPTI G
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