Gene Franean1_6976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6976 
Symbol 
ID5675288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8501108 
End bp8501401 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content66% 
IMG OID641245824 
Producthypothetical protein 
Protein accessionYP_001511215 
Protein GI158318707 
COG category[S] Function unknown 
COG ID[COG5416] Uncharacterized integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGTAG ATCAGCACGT CGTGAGGTCG ACCCGCACAA GTCGAACCTG GACGGCGCTG 
ATTCTGTTCG TCGTAGTCCT GATTCTCCTG CTGGTGTTCA TCCTGCAGAA CGGCCAGAGC
GTCAAGGTGT CGTACCTGGG CGCTGAGGGA AGTATGCCCC TCGCGGTCGC GATGCTGTTC
GCCGCGGCCG GCGGGGCGCT GCTGGTCGCG ATCCCCGGTG TGGGTCGCAT GGTCCAACTG
CGCCGGGTGG CACGCCGTCA CCGAAAGGCC GAGAACATCC CGCCGCCACC GTGA
 
Protein sequence
MPVDQHVVRS TRTSRTWTAL ILFVVVLILL LVFILQNGQS VKVSYLGAEG SMPLAVAMLF 
AAAGGALLVA IPGVGRMVQL RRVARRHRKA ENIPPPP