| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6969 |
|---|
| Symbol | |
|---|
| ID | 5675793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8493998 |
|---|
| End bp | 8494849 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641245817 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001511208 |
|---|
| Protein GI | 158318700 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.255259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACAC AGGCCGCGTC ACCGCAGGGT GCGGCAACAC AGGCCGCGTC GCCAGAGGTC
GTCTCGCCGG AGGCCGGCCC GCCAGAGGCC GCCTCGTCAC AGGGGCCGGC CGTGCCCGGG
GTGCAGTCGG TGCACCGTGC GTTGGACCTG CTCGAGATCC TCGCGGCGGC CGGCGGCCGG
CTTCCCATGG CCGAGGTCGC GGCGCGCGCG CAGCTGCCGA CGCCGACCGT GCACCGGCTG
CTGCGCACCA TGGTCGAGCG CGGGTACCTG CGGCAGCTGC CCGACCGCAG CTACGCGCTC
GGCTTCCGGC TCGTTCCGCT GGGCGCCCGC GCGAACGCGA TGGTCGGCGC CAACGCGTCC
GGTGTGCTGC ACGACCTCGT CGCCGAGCTG GGCGAGACGG CCAACCTGGC CGTGCTCTCC
GGCGACCAGG CCGAGTACGT CGCCCAGGCG CCGTCGCGGT ATGCGATGCG CATGTTCACC
GAGGTCGGGC GGCGGGTCGA CCTGCACTCG ACCGGCGTGG GCAAGGCACT GCTCGCACAG
CTGGACGACG ACGAGGCGCT CGGGATCATC CGCAGCCGCG GGCTGCCGCG GTACACGGCG
CACACGGTGG GCACCGAGAC GGCGCTGCGC GCGGAGCTGC GCCGCATCCG CGAGCGGGGT
TTCGCGCTCG ACGAGCAGGA GCAGGAGATC GGCGTGCGCT GCGTGGCCAT CGCCCTCGAC
CCGGCGAGCG CGCCGGGGGT CGCGGTCTCG GTGTCCGGGC CGACGGCGCG GATGACCGAC
GAGCTGGTCG AGCGCGCGGT CGGGCTGCTG CAGGCGGCGG CGTCCCGGCT GGCCGGAGAC
CTGCGGGACT GA
|
|---|
| Protein sequence | MSTQAASPQG AATQAASPEV VSPEAGPPEA ASSQGPAVPG VQSVHRALDL LEILAAAGGR
LPMAEVAARA QLPTPTVHRL LRTMVERGYL RQLPDRSYAL GFRLVPLGAR ANAMVGANAS
GVLHDLVAEL GETANLAVLS GDQAEYVAQA PSRYAMRMFT EVGRRVDLHS TGVGKALLAQ
LDDDEALGII RSRGLPRYTA HTVGTETALR AELRRIRERG FALDEQEQEI GVRCVAIALD
PASAPGVAVS VSGPTARMTD ELVERAVGLL QAAASRLAGD LRD
|
|---|
| |