Gene Franean1_6966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6966 
Symbol 
ID5675279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8492361 
End bp8493050 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content77% 
IMG OID641245815 
ProductTetR family transcriptional regulator 
Protein accessionYP_001511206 
Protein GI158318698 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.182707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CTCGGCGGCG CGACGCTGCG CGCAGCCGCC AGGCGCTGCT GGCCGCGGCG 
GCCGACCTGT TCGCCGAGCG CGGCTACGCG GGAACCGCGA TCCGGTCGGT CGGCGACCGC
GCCGGCGTCG ATCCGGCGCT CATCGCTCGC TACTTCGGCG GCAAGGAGGG CCTCTACCAG
GCCGTTCTCG CCGCCGACCC GCTCATCGAA CAGTCCGCTC CGAGTGCGGA CGGCCCACCG
GCCGCCCCGC ACGCACCCGT GCCGGCCGCA TCCGGGGACG ACGGGGCCGG GGACGACGGG
GCCGCGGCCG GGACGGTCGC CGGTCCTCCG GACGAGCCGG CGGCGAGCCC GCTGGCGACA
GTGCACGGGA TGGTGGACCG GGCGTTCGAC AAGTGGACGT CGACCGGCGT GAGCGCCGCC
GCCCAGAACG TCTTCCGCCG GGAGGTCGAC GACGCCGCGC GCCAGGCGAC CCGCGAGCGG
CTCGACACCG TGCTCGAGCC GCTGCGCGGC GCGGCCGACA GCCCCGACCC GCAGCTGGCC
GCCGAGCTGG CTGTCGCTGT GCTGTTCGGG GTCGGCGTCG CCCGGGACGC CGGGACGCTG
ACCCGGCTGT CCGCGGTGTC GGTCGACGAG CTGCGCGCCC CCCTGACCGC GGCCCTCGTG
GCCGCGCTGG GCATCACGGA CTGCCAGTAG
 
Protein sequence
MNTTRRRDAA RSRQALLAAA ADLFAERGYA GTAIRSVGDR AGVDPALIAR YFGGKEGLYQ 
AVLAADPLIE QSAPSADGPP AAPHAPVPAA SGDDGAGDDG AAAGTVAGPP DEPAASPLAT
VHGMVDRAFD KWTSTGVSAA AQNVFRREVD DAARQATRER LDTVLEPLRG AADSPDPQLA
AELAVAVLFG VGVARDAGTL TRLSAVSVDE LRAPLTAALV AALGITDCQ