Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6966 |
Symbol | |
ID | 5675279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8492361 |
End bp | 8493050 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641245815 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001511206 |
Protein GI | 158318698 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.182707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA CTCGGCGGCG CGACGCTGCG CGCAGCCGCC AGGCGCTGCT GGCCGCGGCG GCCGACCTGT TCGCCGAGCG CGGCTACGCG GGAACCGCGA TCCGGTCGGT CGGCGACCGC GCCGGCGTCG ATCCGGCGCT CATCGCTCGC TACTTCGGCG GCAAGGAGGG CCTCTACCAG GCCGTTCTCG CCGCCGACCC GCTCATCGAA CAGTCCGCTC CGAGTGCGGA CGGCCCACCG GCCGCCCCGC ACGCACCCGT GCCGGCCGCA TCCGGGGACG ACGGGGCCGG GGACGACGGG GCCGCGGCCG GGACGGTCGC CGGTCCTCCG GACGAGCCGG CGGCGAGCCC GCTGGCGACA GTGCACGGGA TGGTGGACCG GGCGTTCGAC AAGTGGACGT CGACCGGCGT GAGCGCCGCC GCCCAGAACG TCTTCCGCCG GGAGGTCGAC GACGCCGCGC GCCAGGCGAC CCGCGAGCGG CTCGACACCG TGCTCGAGCC GCTGCGCGGC GCGGCCGACA GCCCCGACCC GCAGCTGGCC GCCGAGCTGG CTGTCGCTGT GCTGTTCGGG GTCGGCGTCG CCCGGGACGC CGGGACGCTG ACCCGGCTGT CCGCGGTGTC GGTCGACGAG CTGCGCGCCC CCCTGACCGC GGCCCTCGTG GCCGCGCTGG GCATCACGGA CTGCCAGTAG
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Protein sequence | MNTTRRRDAA RSRQALLAAA ADLFAERGYA GTAIRSVGDR AGVDPALIAR YFGGKEGLYQ AVLAADPLIE QSAPSADGPP AAPHAPVPAA SGDDGAGDDG AAAGTVAGPP DEPAASPLAT VHGMVDRAFD KWTSTGVSAA AQNVFRREVD DAARQATRER LDTVLEPLRG AADSPDPQLA AELAVAVLFG VGVARDAGTL TRLSAVSVDE LRAPLTAALV AALGITDCQ
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